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Table 1 Summary of the combined interpretation of phylogenetic and positional information

From: Phylogenetic and chromosomal analyses of multiple gene families syntenic with vertebrate Hox clusters

 

2R

3R

Gene family

Phylogenetic support

Comments

Phylogenetic support*

Postional support

Comments

AOC

Yes

 

No

No

 

DLX

Yes

 

Yes

Yes

Uncertain topology regarding some duplications

G6PC

Yes/No

Uncertain timing, only Drosophila as outgroup

Yes

Yes

Can't exclude lineage specific duplication

IGF2BP

Yes

 

Yes

Yes

Can't exclude lineage specific duplication

IGFBP

Yes

 

Yes

Yes

 

MPP

Yes

 

Yes

Yes

Uncertain topology regarding some duplications

NFE

Yes

 

Yes/No

Yes

Uncertain topology

NR1D

Yes/No

Uncertain topology

No

Yes

Can't exclude lineage specific duplication

OSBPL

Yes

 

Yes

Yes

Uncertain topology regarding some duplications

RAR

Yes

 

Yes

Yes

 

SLC4A

Yes

 

Yes

Yes

 

SMARCD

Yes

 

Yes

Yes

Can't exclude lineage specific duplication

THR

Yes

 

Yes

Yes

 

PP

Yes

U

Yes

Yes

Can't exclude lineage specific duplication

  1. * Duplicates in one fish species for one of the mammalian sequences have been considered to be support for 3R.