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Table 3 LRT statistics of branch specific model for Malus branch.

From: Molecular adaptation and expression evolution following duplication of genes for organellar ribosomal protein S13 in rosids

Gene Parameters from MAtest1 M1-MAtest1 comparison MAtest2-MAtest1 comparison Selected positive sites
2δL P Value 2δL P Value
numit rps13 p0 = 0.6485, p1 = 0.2817, (p2 + p3 = 0.0698)
ω0 = 0.12, ω1 = 1, ω2 = 112.98
1.7396 0.4190 1.2140 0.2705 31H, 32Q, 117R (0.5 <P < 0.8)
nucp rps13 p0 = 0.9005, p1 = 0.0733, (p2 + p3 = 0.0262)
ω0 = 0.04, ω1 = 1, ω2 = 96.7
9.7274 0.0077 a 3.5026 0.0613 32Q, 105C
mt rps13 p0 = 0.6646, p1 = 0.3354, (p2 + p3 = 0) ω0 = 0, ω1 = 1, ω2 = 1 0 1 0 1 None
  1. aBoldface indicates the statistically significant difference (P < 0.05).