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Table 2 LRT statistics of site specific model for numit rps13 and nucp rps13.

From: Molecular adaptation and expression evolution following duplication of genes for organellar ribosomal protein S13 in rosids

Gene

Number of sequences

Tree Lengtha

Ksa

Kaa

Ka/Ksa

11th class from M8

M7-M8 comparison

M8a-M8 comparison

Selected positive sites

p, %

Ka/Ks

2δL

P Value

2δL

P Value

numit rps13

7

6.93

5.35

1.30

0.24

2.7

9.7400

9.0670

0.0107 b

7.5048

0.0031

28R, 114R (P > 0.8)

nucp rps13

7

4.08

5.16

0.31

0.06

1.6

1.6268

4.7952

0.0909

0.8448

0.1790

None

  1. aEstimated using M0 model in PAML.
  2. bBoldface indicates the statistically significant difference (P < 0.05).