Table 3 Evolutionary rate control genes and their pairwise synonymous distances.
From: Tracking the evolution of a cold stress associated gene family in cold tolerant grasses
Gene | Accession number | Synonymous distance (dS) | |||
|---|---|---|---|---|---|
Ta vs Lp | TaLp vs Os | ||||
Ta | Lp | Os | dS | dS* | |
Cytosolic glyceraldehyde-3-phosphate dehydrogenase | EF592180 | EF463063 | NM_001059674 | 0.33 (0.04) | 0.47 (0.06) |
Actin | AB181991 | AY014279 | NM_001062196 | 0.30 (0.03) | 0.49 (0.07) |
Gibberellin 20-oxidase | Y14008 | AY014281 | NM_001058486 | 0.37 (0.02) | 0.70 (0.13) |
Phytochrome B | AF137331 | AF137308 | NM_001056445 | 0.39 (0.04) | 0.57 (0.07) |
Casein protein kinase 2 alpha subunit | AB052133 | AB213317 | NM_001065287 | 0.30 (0.05) | 0.48 (0.09) |
Na+/H+ antiporter precursor | AY461512 | AY987047 | NM_001074903 | 0.33 (0.04) | 0.58 (0.09) |
Putative plasma membrane Na+/H+ antiporter | AY326952 | AY987046 | CB634542 | 0.14 (0.02) | 0.44 (0.06) |
Myo-inositol phosphate synthase | AF542968 | AY154382 | NM_001055777 | 0.32 (0.04) | 0.57 (0.07) |
Cinnamoyl CoA reductase | CK161291 | AF010290 | NM_001052667 | 0.28 (0.01) | 0.41 (0.03) |
Fructan beta-(2,1) fructosidase | AJ564996 | DQ016297 | NM_001052039 | 0.39 (0.06) | 0.72 (0.11) |