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Table 3 List of the taxa examined in this study and their GenBank accession numbers.

From: Phylogeny and biogeography of African Murinae based on mitochondrial and nuclear gene sequences, with a new tribal classification of the subfamily

Famille

Taxa

cyt b

IRBP

GHR

Murinae

Aethomys chrysophilus

AJ604515

AY326075

NA

 

Apodemus argenteus

AB032848

AB032855

NA

 

Apodemus flavicollis

AB032853

AB032860

AM910943*

 

Apodemus mystacinus

AF159394

AJ311158

AM910942*

 

Apodemus speciosus

AB032849

AB032856

NA

 

Apodemus sylvaticus

AB033695

AB032863

NA

 

Apomys hylocoetes

AY324467

NA

AY294915

 

Archboldomys luzonensi

AY324460

DQ191495

NA

 

Arvicanthis niloticus

AF004569

DQ022386*

AM910944*

 

Arvicanthis somalicus

AF004573

NA

AY294918

 

Bandicota bengalensis

AM408340

AM408331

AM910945*

 

Batomys granti

AY324459

DQ191496

AY294917

 

Berylmys bowersii

AM408337

AM407896

AM910946*

 

Bunomys chrysocomus

AM910934*

AM910937*

AM910947*

 

Chrotomys gonzalensi

AY324461

DQ191503

NA

 

Colomys goslingi

AF518372

DQ022395 *

AM910948*

 

Conilurus penicilatus

AM910935*

AM910938*

AM910949*

 

Cremnomys cutchicus

DQ022381

DQ022384

NA

 

Dasymys incomtus

AF141217

EU292143*

AM910950*

 

Desmomys harringtoni

AF141206

EU292144*

NA

 

Diplothrix legata

AB033696

AB033706

NA

 

Golunda ellioti

AM408338

AM408332

AM910951*

 

Grammomys macmillani

AM408345

AM408329

AM910980*

 

Grammomys sp.

AF141218

DQ022389

AM910952*

 

Heimyscus fumosus

AF518333

DQ022397*

AM910953*

 

Hybomys univittatus

AF141219

DQ022388*

DQ019059

 

Hydromys chrysogaster

AM408339

AM408319

AM910954*

 

Hylomyscus parvus

AF518330

DQ022399

DQ019060

 

Hylomyscus stella

AF518331

AM408320

AM910955*

 

Lemniscomys striatus

AF141210

AM408321

AM910956*

 

Leopoldamys edwardsi

AJ698881

AJ698897

NA

 

Malacomys edwardsi

DQ022379

DQ022392*

AM910958*

 

Malacomys longipes

AM408341

DQ022393*

AM910957*

 

Mastomys erythroleucus

AF518338

AM408335

AM910959*

 

Mastomys natalensis

AF518342

AY518342

NA

 

Mastomys pernanus

AF518343

DQ022403*

AM910960*

 

Mastomys kollmannspergeri

AF518345

DQ022402*

AM910961*

 

Maxomys whiteheadi

EU292150*

AY326094

NA

 

Micaelamys namaquensis

AF141215

AM408330

AY294914

 

Micromys minutus

AB033697

AB033710

NA

 

Millardia kathleenae

EU292148*

EU292145*

AM910963*

 

Millardia meltada

AF141221

AM408322

AM910962*

 

Mus (Coelomys) crociduroides

AJ698878

AJ698894

AM910964*

 

Mus (Nannomys) minutoides

AY057816

AJ875086

NA

 

Mus (Mus) musculus

V00711

AB033711

AY271378

 

Mus (Pyromys) platythrix

AJ698880

AJ698895

NA

 

Mylomys dybowski

AF141212

EU292146*

AM910965*

 

Myomyscus brockmani

AF518353

DQ022407*

AM910966*

 

Myomyscus verreauxii

AF518355

DQ022408*

AM910967*

 

Myomyscus yemeni

AF518357

DQ022409*

AM910968*

 

Niviventer niviventer

AM408344

AM408323

AM910969*

 

Oenomys hypoxanthus

AM408342

AM408324

AM910970*

 

Otomys angoniensis

AM408343

AM408325

AM910971*

 

Parotomys sp.

NA

NA

AY294912

 

Pelomys fallax

DQ022382

DQ022391

NA

 

Phloeomys cumingi

DQ191484

AY326103

DQ019076

 

Praomys daltoni

AF518349

DQ022406*

AM910972*

 

Praomys degraaffi

AF518359

DQ022410

NA

 

Praomys jacksoni

AF518361

AM408326

AM910973*

 

Praomys misonnei

AF518364

DQ022412

NA

 

Praomys tullbergi

AF518365

AM408327

AM910974*

 

Praomys verschureni

AF518373

DQ022394*

NA

 

Pseudomys australis

AM910936*

AM910939*

AM910975*

 

Rattus exulans

DQ191486

AY326105

DQ019074

 

Rattus norvegicus

VO1556

AB033714

J04811

 

Rattus rattus

AB033702

AM408328

AM910976*

 

Rattus tanezumi

AB096841

AB096856

NA

 

Rhabdomys pumilio

AF141214

AY326106

AY294913

 

Rhynchomys isarogensis

AY324462

AY326108

DQ019075

 

Stenocephalemys albipes

AF518347

DQ022404

AM910977*

 

Stenocephalemys albocaudata

AF518370

DQ022414*

AM910978*

 

Stochomys longicaudatus

EU292149*

EU292147*

DQ019076

 

Sundamys muelleri

AM408340

AY326111

AM910979*

 

Tokudaia osimensis

AB029429

AB033712

AM910981*

 

Zelotomys hildegardeae

AF518375

DQ022396*

DQ019080

Deomyinae

Acomys

AJ233953 (cahirinus)

AJ698898 (cahirinus)

AY294923 (ignitus)

 

Deomys ferrugineus

NA

AY326084

AY294922

 

Lophuromys flavopunctatus

AY828236

AY326091

AY294921

Gerbillinae

Desmodillus auricularis

AJ851272

AM910940*

DQ019048

 

Gerbillurus paeba

AJ430557

AM910941*

NA

 

Gerbillus gerbillus

AJ851269

NA

DQ019049

 

Meriones

AF159405 (unguiculatus)

AY326095 (unguiculatus)

AF332021 (shawi)

 

Gerbilliscus robustus

AJ875234

AY326113

AY294920

  1. *: newly acquired sequences. NA: sequence not available.