|
Myoglobin
|
TGFB2
|
ND2
|
ATP6
|
ND3
|
Cytochrome-b
|
---|
Model
|
K80 + Γ
|
HKY + Γ
|
GTR + Γ + I
|
GTR + Γ + I
|
GTR + Γ + I
|
GTR + Γ + I
|
1st position
|
NA
|
NA
|
GTR + Γ + I
|
GTR + Γ + I
|
SYM + Γ
|
GTR + Γ + I
|
2nd position
|
NA
|
NA
|
GTR + Γ + I
|
GTR + Γ + I
|
GTR + Γ
|
GTR + Γ + I
|
3rd position
|
NA
|
NA
|
GTR + Γ + I
|
GTR + Γ + I
|
HKY + Γ + I
|
GTR + Γ
|
Freq A
|
0.25
|
0.25 (0.22–0.28)
|
0.37 (0.34–0.39)
|
0.33 (0.30–0.36)
|
0.32 (0.28–0.36)
|
0.32 (0.30–0.35)
|
Freq C
|
0.25
|
0.21 (0.18–0.24)
|
0.41 (0.39–0.43)
|
0.44 (0.41–0.46)
|
0.41 (0.37–0.45)
|
0.44 (0.42–0.47)
|
Freq G
|
0.25
|
0.24 (0.21–0.27)
|
0.06 (0.05–0.07)
|
0.07 (0.06–0.08)
|
0.09 (0.07–0.11)
|
0.08 (0.07–0.09)
|
Freq T
|
0.25
|
0.30 (0.27–0.33)
|
0.16 (0.15–0.18)
|
0.16 (0.14–0.18)
|
0.18 (0.16–0.21)
|
0.16 (0.14–0.17)
|
A-C
|
NA
|
NA
|
0.016 (0.012–0.020)
|
0.020 (0.013–0.027)
|
0.022 (0.013–0.032)
|
0.014 (0.009–0.020)
|
A-G
|
NA
|
NA
|
0.663 (0.607–0.718)
|
0.564 (0.484–0.642)
|
0.535 (0.429–0.637)
|
0.549 (0.474–0.621)
|
A-T
|
NA
|
NA
|
0.021 (0.014–0.029)
|
0.035 (0.022–0.050)
|
0.015 (0.005–0.029)
|
0.032 (0.019–0.047)
|
C-G
|
NA
|
NA
|
0.005 (0.0002–0.014)
|
0.024 (0.012–0.039)
|
0.007 (0.0002–0.218)
|
0.010 (0.0002–0.020)
|
C-T
|
NA
|
NA
|
0.232 (0.188–0.281)
|
0.323 (0.252–0.399)
|
0.327 (0.240–0.425)
|
0.321 (0.259–0.390)
|
G-T
|
NA
|
NA
|
0.062 (0.035–0.094)
|
0.035 (0.010–0.069)
|
0.094 (0.051–0.146)
|
0.074 (0.041–0.114)
|
Γ
|
0.10 (0.09–.12)
|
0.586 (0.382–0.936)
|
0.997 (0.826–1.195)
|
0.901 (0.676–1.158)
|
0.910 (0.604–1.295)
|
0.869 (0.702–1.069)
|
I
|
NA
|
NA
|
0.338 (0.302–0.374)
|
0.400 (0.345–0.447)
|
0.368 (0.287–0.433)
|
0.465 (0.426–0.501)
|
Ts/Tv
|
4.24 (3.08–5.75)
|
5.90 (4.32–7.795)
|
NA
|
NA
|
NA
|
NA
|
-ln (ML)
|
2198.81
|
2131.71
|
10556.45
|
6550.30
|
3266.29
|
8623.79
|
-ln (BI)
|
2442.98
|
2179.36
|
10582.97
|
6585.41
|
3305.87
|
8658.36
|
-ln (BI partitioned)
|
NA
|
NA
|
10161.23
|
6232.87
|
3146.47
|
8128.06
|
- NA means not applicable. Reported likelihood scores for the BI refer to the arithmetic mean.