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Table 5 hsp70-related pseudogenes in the human genome: Type and evolutionary origin

From: hsp70 genes in the human genome: Conservation and differentiation patterns predict a wide array of overlapping and specialized functions

Namea

Type PD

Ori PD

Ori

Sim

Name

Type PD

Ori PD

Ori

Sim

P1.1

P

HSPA5

HSPA51

90

P7.2

P

HSPA8

HSPA81

71

P1.2

P

-

HSPA81

88

F7

-

-

HSPA82

46

P2.1

P

HSPA8

HSPA81

68

P8

D

-

HSPA81

76

P2.2

P

-

HSPA9B1

83

F8.1

A

-

HSPA82

46

P2.3

A

-

HSPA82

27

F8.2

-

-

HSPA82

33

P3.1

P

-

HSPA81

87

P9

D

-

HSPA82

31

P3.2

A

HSPA6

HSPA81

74

P10

-

-

HSPA82

23

P4

D

-

HSPA82

30

P12.1

D

HSPA8

HSPA81

88

P5

P

HSPA8

HSPA81

73

P12.2

D

HSPA8

HSPA81

69

F5

-

-

HSPA82

70

F13

A

-

HSPA82

30

F6.1

D

-

HSPA82

36

F18.1

A

-

HSPA9B2

87

F6.2

-

-

HSPA82

27

F18.2

-

-

HSPA82

51

F6.3

A

-

HSPA82

87

PX.1

P

-

HSPA81

79

F6.4

-

-

HSPA82

30

PX.2

D

HSPA6

HSPA82

73

P7.1

P

HSPA8

HSPA81

90

PX.3

P

HSPA8

HSPA81

83

  1. aAbbreviations and symbols: pseudogenes with a predicted pseudocoding region ≥ 300 aa are called P, and those shorter than 300 aa are called F (fragment); PD, Pseudogene Database [19]; Type PD, predicted pseudogene type as per the Pseudogene Database; Ori PD, pseudogene origin as per the Pseudogene Database; Ori, pseudogene origin determined in this work, based on phylogenetic-tree branching (1 superscript) and based on similarity with the closest sequence (2 superscript); Sim, percent similarity (identities plus conservative substitutions of the predicted pseudoprotein); P, processed (retrotranscribed); A, ambiguous; D, duplicated.