Skip to main content

Table 2 Synonymous (dS) and non-synonymous (dN) ratios between D. pseudoobscura and D. miranda and QRNA predictions of the novel genes

From: Male-biased genes are overrepresented among novel Drosophila pseudoobscurasex-biased genes

Gene

dN

dS

dN/dS

LRT#

QRNA*

SAGE_M_99

0.029

0.063

0.462

0.570

O287

SAGE_M_79

0.045

0.000

-

0.208

O328

SAGE_M_310

0.014

0.036

0.394

0.270

O202

SAGE_M_71

0.013

0.134

0.097

0.049

O154

SAGE_M_22_3

-

-

-

-

O416

SAGE_F_108

0.024

0.056

0.430

0.102

R460

  1. #Likelihood ratio test was performed using D. pseudoobscura, D. persimilis and D. miranda.
  2. * O – other conserved non-coding sequences; R – RNA secondary structure. The number after the letter indicates the number of nucleotides assigned by QRNA to this category, which is in all cases equivalent to length of the full transcript.