Skip to main content

Table 1 Evidence for conserved synteny between NITR gene clusters

From: The medaka novel immune-type receptor (NITR) gene clusters reveal an extraordinary degree of divergence in variable domains

Zebrafish Chr

Zebrafish gene

Medaka ortholog

Medaka Chr

7

htatip2

HTATIP2

3

7

zgc:112498

PRMT3

3

7

slc6a5

SLC6A5

3

7

NITR cluster

NITR cluster

18

7

map4k2l

MAP4K2

18

7

men1

MEN1

18

7

rtn3

Q6IEI5_ORYLA

18

14

tspan7

TSPAN6

10

14

chrnb3b

CHRNB3 (2 of 2)

10

14

LOC555254

ITGA6

10

14

NITR cluster

NITR cluster

10

14

fgfrl1b

FGFRL1 (2 of 2)

10

14

cstf2

CSTF2

10

14

xkrx

XKR3

10

  1. Orthologous genes were defined by Ensembl. Zebrafish gene order was determined with version Zv6 of the zebrafish genome and Ensembl.