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Table 3 Positive positions selected by Bayes Empirical Bayes analysis in model A of the PAML.

From: RPS4Ygene family evolution in primates

   

Change type

  

BEB

Ancestral amino acid

Hsa RPS4Y2

Charge

Polarity

Polarity & Volume

Data Sets

Domain affected

68*

R

H

Cons.

Cons.

Cons.

a, c

S4

70*

I

L

Cons.

Cons.

Cons.

a, b, c

S4

87*

M

I

Cons.

Cons.

Cons.

a, c

S4

104*

D

N

Rad.

Cons.

Cons.

c

Ribosomal-S4E

108*

R

C

Rad.

Cons.

Rad.

a, c

Ribosomal-S4E

185*

G

A

Cons.

Rad.

Cons.

a, b, c

KOW

  1. Data Sets: a) for RPS4Y2; b) for RPS4Y1 and RPS4Y2; and c) for RPS4Y1, RPS4Y2 and RPS4X.
  2. Cons. for conservative change; Rad. for radical change.
  3. * Posterior probability >0.95.
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BMC Ecology and Evolution

ISSN: 2730-7182

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