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Table 2 Human-macaque divergence and human coding polymorphisms of genes positively selected in catarrhine primates.

From: Directional and balancing selection in human beta-defensins

Gene

Human – macaque non-synonymous fixed changes

Human – macaque synonymous fixed changes

Human non-synonymous polymorphisms

Human synonymous polymorphisms

Rs number

Human non-synonymous polymorphic sites

Indigenous Australians

UK population

Other sub-saharan Africans

Mbuti/Biaka

Agriculturalists

Hunter-Gatherers

Fisher's exact test p value (not corrected for multiple tests)

African

Non-African

Fisher's exact test p value (not corrected for multiple tests)

DEFB127

8

6

4

1

16995685

R71S

4

8

0

1

8

5

0.175

1

12

0.002

     

-

R71H

0

0

0

2

0

2

0.288

2

0

0.208

     

12624954

G31R

4

8

0

1

8

5

0.175

1

12

0.002

     

-

K58R

0

0

1

0

1

0

0.459

1

0

0.459

DEFB120

13

2

3

0

-

H28R

0

0

1

3

1

3

0.371

4

0

0.040

     

-

R46C

1

0

0

0

0

1

0.541

0

1

0.541

     

-

*89EL*

0

0

1

3

1

3

0.371

4

0

0.040

DEFB132

12

8

5

2

-

W41S

0

0

1

2

1

2

0.561

3

0

0.092

     

-

P63Q

0

0

3

1

3

1

0.248

4

0

0.040

     

-

L70F

0

0

1

2

1

2

0.561

0

3

0.152

     

-

V93I/T

4

0

0

2

0

6

0.021

2

4

0.418

     

-

V93A/T

3

0

1

9

1

12

0.002

10

3

0.015

DEFB118

11

7

2

0

-

C34R

0

1

0

0

1

0

0.459

0

1

0.541

     

-

I56V

0

0

1

4

1

4

0.234

5

0

0.017

DEFB1

6

7

2

1

-

F24C

0

0

0

1

0

1

0.541

1

0

0.459

     

2738047

V38I

0

0

0

1

0

1

0.541

1

0

0.459

n

50

30

16

4

-

16

20

20

14

20

34

40

-

34

40

-