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Table 1 Selection frequency for species included in the Arthropoda OTU, Number of sequences per species and their corresponding frequency in the two datasets used for Figures 5 and 6 and constructed according to two different selection criteria: longest sequence (LC) or smallest evolutionary distance (SC)

From: SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics

 

LC

SC

 

number of sequences

frequency

number of sequences

frequency

Drosophila melanogaster

133

95%

16

11%

Anopheles gambiae

3

2%

34

24%

Bombyx mori

1

1%

12

9%

Litopenaeus vannamei

1

1%

2

1%

Hypsibius dujardini

1

1%

3

2%

Myzus persicae

1

1%

  

Tribolium castaneum

  

11

8%

Apis mellifera

  

9

6%

Spodoptera frugiperda

  

8

6%

Amblyomma americanum

  

7

5%

Ctenocephalides felis

  

7

5%

Mesobuthus gibbosus

  

6

4%

Ornithodoros porcinus

  

5

4%

Manduca sexta

  

4

3%

Glossina morsitans

  

3

2%

Toxoptera citricida

  

3

2%

Callosobruchus maculatus

  

3

2%

Curculio glandium

  

2

1%

Acyrthosiphon pisum

  

1

1%

Ips pini

  

1

1%

Biphyllus lunatus

  

1

1%

Dermacentor variabilis

  

1

1%

Clytus arietis

  

1

1%