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Table 6 Conservation profiles of TARs among vertebrates

From: Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human

Conservation profile *

# of hits

fraction

Human ∩ Chimp

15,757

92%

Human ∩ Chimp ∩ rodents

8,828

51%

Human ∩ Chimp ∩ rodents ∩ dog

5,988

35%

Human ∩ Chimp ∩ rodents ∩ dog ∩ chicken

2,435

14%

Human ∩ Chimp ∩ rodents ∩ dog ∩ chicken ∩ pufferfish

1,244

7%

Human ∩ Chimp ∩ rodents ∩ dog ∩ chicken ∩ pufferfish ∩ sea squirt

276

2%

Human ∩ macaque

5,955

35%

Human ∩ macaque ∩ chimp

5,815

34%

Human ∩ Rodent

8,776

51%

Human ∩ Rodent ∩ dog

6,166

36%

Human ∩ Rodents ∩ dog ∩ chicken

2,493

14%

Human ∩ Rodent ∩ dog ∩ chicken ∩ pufferfish

1,270

7%

Human ∩ Rodent ∩ dog ∩ chicken ∩ pufferfish ∩ sea squirt

276

2%

Num. of TARs in human AND chimp, but NOT in rodents

6,929

40%

Num. of TARs in human AND chimp, but NOT in any other vertebrates

4,806

28%

Num. of TARs in human and chimp, but NOT in rodents, and NOT in databases (Rfam, RNAdb, mirBase, NONCODE)

6,132

36%

Num. of TARs in human and chimp, but NOT in any other genomes, and NOT in databases (Rfam, RNAdb, mirBase, NONCODE)

4,574

27%

Total # of TARs

17,198

 
  1. * ∪ represents the union of two or more sets