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Table 1 Maculinea species used in this study, lineages detected in CR1 clade, and GenBank accession numbers of isolated clones.

From: CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission

genus species lineage No. of clones with RT Accession numbers
Maculinea teleius   15  
   lineage A 7 [GenBank:DQ823008],
     [GenBank:DQ823009],
     [GenBank:DQ823010],
     [GenBank:DQ823011],
     [GenBank:DQ823016],
     [GenBank:DQ823017],
     [GenBank:DQ823018]
   lineage B 6 [GenBank:DQ823029];
     [GenBank:DQ823030];
     [GenBank:DQ823035],
     [GenBank:DQ823036],
     [GenBank:DQ823037],
     [GenBank:DQ823038]
   lineage C 2 [GenBank:DQ836363];
     [GenBank:DQ836364]
Maculinea nausithous   13 (+1)*  
   lineage A 8 [GenBank:DQ823012],
     [GenBank:DQ823013],
     [GenBank:DQ823014],
     [GenBank:DQ823019],
     [GenBank:DQ823020],
     [GenBank:DQ823021],
     [GenBank:DQ823022],
     [GenBank:DQ823023]
   lineage B 3 [GenBank:DQ823031];
     [GenBank:DQ823032];
     [GenBank:DQ823039]
   lineage C 2 [GenBank:DQ836365];
     [GenBank:DQ836366]
Maculinea alcon   10 (+1)*  
   lineage A 8 [GenBank:DQ823012];
     [GenBank:DQ823024],
     [GenBank:DQ823025],
     [GenBank:DQ823026],
     [GenBank:DQ823027],
     [GenBank:DQ823028]
   lineage B 2 [GenBank:DQ823033];
     [GenBank:DQ823034]
Maculinea arion   9  
   lineage A 6 [GenBank:DQ994657],
     [GenBank:DQ994658],
     [GenBank:DQ994659],
     [GenBank:DQ994660],
     [GenBank:DQ994661],
     [GenBank:DQ994662]
   lineage B 3 [GenBank:DQ994663],
     [GenBank:DQ994664],
     [GenBank:DQ994665]
  1. * single clones appeared to be R1 elements