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Table 1 Best-fit mutation model for the three mitochondrial loci and the concatenated sequence selected by the hierarchical likelihood ratio test (hLRT) implemented in Modeltest 3.5.mac.

From: Unexpected species diversity of Malagasy primates (Lepilemur spp.) in the same biogeographical zone: a morphological and molecular approach with the description of two new species

Locus

Method

Model

Base

Nst

Alpha

Pinvar

TRatio

D-loop

ML, NJ

HKY+G

0.3066 0.2151 0.1828 0.2955

2

0.1752

0

3.2075

Cyt B

ML, NJ

HKY+I+G

0.3092 0.3229 0.1219 0.2460

2

3.5808

0.5469

12.5738

ND4

ML, NJ

HKY+G

0.3372 0.2697 0.1127 0.2804

2

0.2736

0

8.1268

concatenated

ML, NJ

HKY+I+G

0.3124 0.2661 0.1377 0.2838

2

0.8801

0.3833

6.1953

  1. Nst: number of substitution types
  2. Pinvar: assumed proportion of invariable sites
  3. Alpha: shape parameter
  4. TRatio: transition/transversion ratio
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BMC Ecology and Evolution

ISSN: 2730-7182

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