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Table 3 Proteins that are Specific for the Bacteroidales and Flavobacteriales Orders

From: Phylogeny and molecular signatures (conserved proteins and indels) that are specific for the Bacteroidetes and Chlorobi species

Genome ID No. [Accession No.]

Possible/Predicted Function

Genome ID No. [Accession No.]

Possible/Predicted Function

PG0336 [NP_904650]

Hypothetical protein

PG1276 [NP_905457]

DNA-binding protein, histone-like family

PG1302 [NP_905476]

Hypothetical protein

PG1389 [NP_905551]

DNA-binding protein, histone-like family

PG1537 [NP_905677]

Hypothetical protein

PG1444 [NP_905595]

Hypothetical protein

PG1251 [NP_905435]

Conjugative transposon protein TraJ

PG1475 [NP_905621]

Conjugative transposon protein TraN

PG2030 [NP_906097]

Hypothetical protein

PG1478 [NP_905624]

Conjugative transposon protein TraK

PG1492 [NP_905638]

Hypothetical protein

PG1479 [NP_905625]

Conjugative transposon protein TraJ

PG0302 [NP_904618]

Hypothetical protein

PG1482 [NP_905628]

Conjugative transposon protein TraF

PG0330 [NP_904645]

DNA-binding protein, histone-like family; smart00411, BHL

PG1483 [NP_905629]

Conjugative transposon protein TraE

PG0555 [NP_904845]

DNA-binding protein, histone-like family

PG1488 [NP_905634]

Hypothetical protein

PG0829 [NP_905084]

Hypothetical protein

PG1494 [NP_905640]

Hypothetical protein

PG0870 [NP_905118]*

Hypothetical protein

PG2040 [NP_906106]

DNA-binding protein, histone-like family

PG0875 [NP_905123]

TnpA; DNA replication, recombination & repair, COG2452

PG2127 [NP_906183]

Hypothetical protein

PG1206 [NP_905397]c

Mobilizable transposon, tnpC protein

BF1773 [YP_099054]*

Probable truncated integrase; cd01185, INT_Tn4399

Missing in Porphyromonas gingivalis W83

BF0127 [YP_097410]

TraB

BF1727 [YP_099008]

Putative outer membrane protein maybe involved in nutrient binding

BF0136 [YP_097419]

Tetracycline resistance element mobilization: RteC

BF1860 [YP_099142]

Hypothetical protein

BF0146 [YP_097429]

Hypothetical protein

BF1926 [YP_211559]

Hypothetical protein

BF0319 [YP_097602]*

Putative exported protein

BF2130 [YP_099411]

Hypothetical protein

BF0342 [YP_097625]

Putative exported protein

BF2214 [YP_099495]

Hypothetical protein

BF1067 [YP_098351]

Hypothetical protein

BF3164 [YP_100443]

Putative lipoprotein

BF1422 [YP_098707]

Hypothetical protein

BF4258 [YP_101533]

Hypothetical protein

BF1567 [YP_098851]

Hypothetical protein

  
  1. The first five proteins in this table (viz. PG0336, PG1302, PG1537, PG1626, PG2030) are present in all Bacteroidales and Flavobacteriales species listed in Table 1; The other proteins are present in many of the Bacteroidales and Flavobacteriales species.
  2. *Also present in C. phaeobacteroides.
  3. The following proteins are homologous to each other: PG0330, PG0555, PG1276, PG1389, PG2040; PG0829, PG1444, PG1488; PG1251, PG1479; BF1422, BF1860; BF1926, BF4258.