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Table 2 Metzincin genes in the Danio rerio genome and their direct ciona and human orthologues.

From: The evolution of the vertebrate metzincins; insights from Ciona intestinalis and Danio rerio

Zebrafish gene

Human orthologue

Figure

ADAM

  

A clade

  

ADAM10a

ADAM10

2 & S1

ADAM10b

ADAM10

2 & S1

ADAM17a

ADAM17

2 & S1

ADAM17b

ADAM17

2 & S1

B clade

  

ADAM8a

ADAM8

2& S2

ADAM8b

ADAM8

2 & S2

ADAM9a

ADAM9

S2

ADAM11

ADAM11

2 & S2

ADAM12a

ADAM12

2 & S2

ADAM12b a

ADAM12

2 S2

ADAM12c a

ADAM12

2 & S2

ADAM15

ADAM15

2 & S2

ADAM19a

ADAM19

2 & S2

ADAM19b a

ADAM19

S2

ADAM22

ADAM22

2 & S2

ADAM23a

ADAM23

2 & S2

ADAM23b

ADAM23

2 & S2

ADAM28

ADAM28

2 & S2

ADAMLa

 

2 & S2

ADAMLb b

 

2

ADAMLc b

 

2

ADAMLd b

 

2

ADAMTS

  

ADAMTS1

ADAMTS1

3A

ADAMTS2/3

ADAMTS2 and ADAMTS3

3A

ADAMTS5

ADAMTS5

3A

ADAMTS8a

ADAMTS8

3A

ADAMTS8b

ADAMTS8

3A

ADAMTS8c

ADAMTS8

3A

ADAMTS8d

ADAMTS8

3A

ADAMTS9

ADAMTS9

3A

ADAMTS12

ADAMTS12

3A

ADAMTS13

ADAMTS13

3A

ADAMTS15a

ADAMTS15

3A

ADAMTS15b

ADAMTS15

3A

ADAMTS15c

ADAMTS15

3A

ADAMTS18

ADAMTS18

3A

ADAMTSL2a

ADAMTSL2

3B

ADAMTSL2b

ADAMTSL2

3B

ADAMTSL2c

ADAMTSL2

3B

ADAMTSL4

ADAMTSL4

3B

ADAMTSL5

ADAMTSL5

3B

PAPLNa

Papilin

3B

PAPLNb

Papilin

3B

ADAMTSLa

 

3B

ADAMTSLb

 

3B

ADAMTSLc

 

3B

ADAMTSLd

 

3B

ADAMTSLe

 

3B

ADAMTSLf

 

3B

BMP1/TLL

  

BMP1a

BMP1

3C

BMP1b

BMP1

3C

BMP1c

BMP1

3C

TLL1

TLL1

3C

Meprin

  

MEP1Aa

MEP1A

3D

MEP1Ab

MEP1A

3D

MEP1Ac

MEP1A

3D

MEP1B

MEP1B

3D

MMP

  

B clade

  

MMP11a

MMP11

4 & S5

MMP11b

MMP11

4 & S5

MMP23a

MMP23A & B

4 & S5

MMP23b

MMP23A & B

S5

C clade

  

MMP17

MMP17

4 & S6

MMPLa

 

4 & S6

MMPLb

 

4 & S6

MMPLc

 

4 & S6

MMPLd

 

4 & S6

D clade

  

MMPLe

MMP1/3/8/10/12/13/27

4 & S7

E clade

  

MMP14a

MMP14

4 & S8

MMP14b

MMP14

4 & S8

MMP14c

MMP14

4 & S8

MMP15a

MMP15

4 & S8

MMP15b

MMP15

4 & S8

MMP15c

MMP15

4 & S8

MMP16a

MMP16

4 & S8

MMP16b

MMP16

4 & S8

MMP24a

MMP24

4 & S8

MMP24b

MMP24

4 & S8

F clade

  

MMP2

MMP2

4 & S9

MMP7

MMP7

S9

MMP9

MMP9

4 & S9

MMPLf

 

4 & S9

MMPLg

 

4 & S9

MMPLh

 

4 & S9

TIMP

  

TIMP2a

TIMP2

3E

TIMP2b

TIMP2

3E

TIMP2c

TIMP2

3E

TIMP2d

TIMP2

3E

  1. Zebrafish genes listed with their direct ciona and human orthologues, produced from the associated phylogenetic analysis listed. a very short sequences which on limited phylogenetic analysis clearly grouped with the orthologues indicated, however insufficient data to include in Figure 3. b could not be accurately grouped into sub-clades for subsequent analysis following production of guide tree (Fig. S1). Supplementary Figures are located in additional file 4.