Table 2 Identifying sets of synteny blocks using two different approaches to detect orthologs after comparing the proteomes of 107 microbial species
From: Assessing the evolutionary rate of positional orthologous genes in prokaryotes using synteny data
Detection method | Number of pairs of orthologs | Blocks of two adjacent orthologs | Syntenic blocks | |
|---|---|---|---|---|
Number | Mean size | |||
RSD | 2,332,248 | 290,108 | 182,289 | 2.59 genes |
Phylogeny | 2,255,324 | 302,468 | 186,744 | 2.62 genes |
Union | 3,014,995 | 377,256 | 235,519 | 2.60 genes |
Intersection | 1,572,577 | 226,799 | 149,058 | 2.62 genes |