Genomic region | Annealing temperature (°C) | PCR product size (bp) | Restriction enzymes tested | Primer source |
---|---|---|---|---|
matR (intron1) | 58 | 550 | Sau 3AI, Rsa I, Hind III, Mse I, Taq I, Bst UI | [47] |
mh05 | 59 | 1500 4 | - | [91] |
mh09 | 62 | 180 | - | [91] |
mh09' | 62 | 900 4 | - | [91] |
mh33 | 55 | 900 4 | - | [91] |
mh35 | 59 | Not amplified | - | [91] |
mh44 | 59 | Not amplified | - | [91] |
nad1 intron B/C, primers H/I 2 | 55 | 217–248 | - | [6] |
nad3 intron 1 | 58 | 120 | - | [92] |
nad3-rps12 (i.r.) 3 | 58 | 360 | - | [92] |
nad5 intron 1 | 55 | 1100 | Sau 3AI, Rsa I, Hind III, Mse I, Taq I, Bst UI, | [47] |
nad5 intron 4 | 59 | 900 | Sau 3AI, Rsa I, Hind III, Mse I, Taq I, Bst UI, Tru9 I | [93] |
nad7 intron 1 | 61 | 1200 | Sau 3AI, Rsa I, Hind III, Taq I, Bst UI, Tru9 I | [47] |
SSU rRNA region V1 | 62 | 400 | - | [94] |
SSU rRNA region V7 | 50 | 250 | - | [94] |