Skip to main content

Table 1 Differences observed for the five hemiascomycetous yeasts.

From: Yarrowia lipolytica vesicle-mediated protein transport pathways

 

S. cerevisiae

Y. lipolytica

C. glabrata

K. lactis

D. hansenii

COPII

Sec24p, Sfb2,3p (Sec24p-related)

2 proteins

3 proteins

2 proteins

2 proteins

 

Sec13p

1 protein

2 proteins

1 protein

1 protein

 

Sed4p

no hits

1 protein

no hits

no hits

Adaptor

Aps1,2,3p

2 proteins

3 proteins

3 proteins

3 proteins

 

Gga1,2p

1 protein (Gga2p)

1 protein (Gga2p)

1 protein (Gga2p)

1 protein (Gga2p)

Sorting Nexin

Snx41,42p

1 protein

2 proteins

2 proteins

2 proteins

Yptp

Ypt7p

1 protein

1 protein

1 protein

2 proteins

 

Ypt10p

no hits

1 protein

no hits

no hits

 

Ypt11p

no hits

1 protein

1 protein

no hits

 

Ypt31-32p

2 proteins

2 proteins

1 protein (Ypt31p)

1 protein (Ypt32p)

 

Ypt51,52,53p

3 proteins

2 proteins

3 proteins

3 proteins

 

no hits

Rab2,4p-related

no hits

no hits

no hits

Yptp regulation

Yos1p

no hits

no hits

no hits

1 protein

 

Gyp4p

no hits

no hits

no hits

no hits

 

Gyl1p

no hits

1 protein

no hits

no hits

COG complex

Cog1p

no hits

1 protein

1 protein

no hits

 

Cog2p

1 protein

1 protein

1 protein

1 protein

 

Cog7p

no hits

1 protein

1 protein

1 protein

Arfp

Arf1,2,3p

2 proteins(Arf1,3p)

2 proteins(Arf1,2p)

2 proteins (Arf2,3p)

3 proteins

 

Arl1p

2 proteins

1 protein

1 protein

1 protein

Arl3p localization

NatC complex (3 proteins)

2 proteins

3 proteins

3 proteins

3 proteins

GARP complex

Vps51p

no hits

1 protein

1 protein

no hits

SNARE-Qa

Vam3p

Pep12p-like

1 protein

1 protein

Pep12p-like

 

Sso1,2p

3 proteins

2 proteins

1 protein (Sso2p)

1 protein (Sso2p)

SNARE-Qb,Qc

Spo20p

no hits

no hits

no hits

no hits

SNARE-Qc

Sft1p

1 protein

no hits

1 protein

1 protein

 

Syn8p

1 protein

no hits

no hits

1 protein

SNARE-R

Nyv1p

1 protein

1 protein

1 protein

no hits

 

Snc1,2p

2 proteins

2 proteins

1 protein (Snc2p)

1 protein (Snc2p)

Exocytosis SNARE regulation proteins

Tpd3p (CAPP regulatory subunit)

1 protein

2 proteins

1 protein

1 protein

 

Tpk1,2,3p (PKA)

1 protein

2 proteins

2 proteins

1 protein

SNARE recycling

Sec18p

1 protein

2 proteins

1 protein

1 protein

  1. See Additional file 2 for the list of proteins potentially implicated in vesicular transport.