TY - CHAP AU - Berta, A. AU - Adam, P. ED - de Buffrenil, V. ED - Mazin, J. -. M. PY - 2001 DA - 2001// TI - The evolutionary biology of pinnipeds BT - Secondary Adaptation of Tetrapods to Life in the Water PB - Verlag Dr. Frederich Pfeil CY - Germany ID - Berta2001 ER - TY - JOUR AU - Deméré, T. A. AU - Berta, A. AU - Adam, P. J. PY - 2003 DA - 2003// TI - Pinnipedimorph evolutionary biogeography JO - Bull Amer Mus Nat Hist VL - 279 ID - Deméré2003 ER - TY - CHAP AU - Wozencraft, W. C. ED - Gittleman, J. L. PY - 1989 DA - 1989// TI - Classification of the recent Carnivora BT - Carnivore Behaviour, Ecology and Evolution PB - Chapman and Hall CY - London, UK ID - Wozencraft1989 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Russell, A. P. PY - 1996 DA - 1996// TI - A morphological perspective on the phylogenetic relationships of the extant phocid seals (Mammalia: Carnivora: Phocidae) JO - Bonner Zool Monogr VL - 41 ID - Bininda-Emonds1996 ER - TY - JOUR AU - Vrana, P. B. AU - Milinkovitch, M. C. AU - Powell, J. R. AU - Wheeler, W. C. PY - 1994 DA - 1994// TI - Higher level relationships of arctoid Carnivora based on sequence data and "total evidence" JO - Mol Phylogenet Evol VL - 3 ID - Vrana1994 ER - TY - JOUR AU - Arnason, U. AU - Bodin, K. AU - Gullgerg, A. AU - Ledje, C. AU - Mouchaty, S. PY - 1995 DA - 1995// TI - A molecular view of pinniped relationships with a particular emphasis on the true seals JO - J Mol Evol VL - 40 ID - Arnason1995 ER - TY - JOUR AU - Lento, G. M. AU - Hickson, R. E. AU - Chambers, G. K. AU - Penny, D. PY - 1995 DA - 1995// TI - Use of spectral analysis to test hypotheses on the origin of pinnipeds JO - Mol Biol Evol VL - 12 ID - Lento1995 ER - TY - JOUR AU - Ledje, C. AU - Arnason, U. PY - 1996 DA - 1996// TI - Phylogenetic analysis of complete cytochrome b genes of the order Carnivora with emphasis on the Caniformia JO - J Mol Evol VL - 42 ID - Ledje1996 ER - TY - JOUR AU - Ledje, C. AU - Arnason, U. PY - 1996 DA - 1996// TI - Phylogenetic relationships within caniform carnivores based on analysis of the mitochondrial 12S rRNA gene JO - J Mol Evol VL - 43 ID - Ledje1996 ER - TY - JOUR AU - Arnason, U. AU - Adegoke, J. A. AU - Bodin, K. AU - Born, E. W. AU - Esa, Y. B. AU - Gullberg, A. AU - Nilsson, M. AU - Short, R. V. AU - Xu, X. AU - Janke, A. PY - 2002 DA - 2002// TI - Mammalian mitogenomic relationships and the root of the eutherian tree JO - PNAS VL - 99 ID - Arnason2002 ER - TY - JOUR AU - Davis, C. S. AU - Delisle, I. AU - Stirling, I. AU - Siniff, D. B. AU - Strobeck, C. PY - 2004 DA - 2004// TI - A phylogeny of the extant Phocidae inferred from complete mitochondrial DNA coding regions JO - Mol Phylogenet Evol VL - 33 ID - Davis2004 ER - TY - JOUR AU - Delisle, I. AU - Strobeck, C. PY - 2005 DA - 2005// TI - A phylogeny of the Caniformia (order Carnivora) based on 12 complete protein-coding mitochondrial genes JO - Mol Phylogenet Evol VL - 37 ID - Delisle2005 ER - TY - JOUR AU - Flynn, J. J. AU - Finarelli, J. A. AU - Zehr, S. AU - Hsu, J. AU - Nedbal, M. A. PY - 2005 DA - 2005// TI - Molecular phylogeny of the Carnivora (Mammalia): assessing the impact of increased sampling on resolving enigmatic relationships JO - Syst Biol VL - 54 ID - Flynn2005 ER - TY - JOUR AU - Arnason, A. AU - Gullberg, A. AU - Janke, A. AU - Kullberg, M. AU - Lehman, N. AU - Petrov, E. A. AU - Väinölä, R. PY - 2006 DA - 2006// TI - Pinniped phylogeny and a new hypothesis for their origin and dispersal JO - Mol Phylogenet Evol VL - 46 ID - Arnason2006 ER - TY - JOUR AU - Fulton, T. L. AU - Strobeck, C. PY - 2006 DA - 2006// TI - Molecular phylogeny of the Arctoidea (Carnivora): effect of missing data on supertree and supermatrix analyses of multiple gene data sets JO - Mol Phylogenet Evol VL - 41 ID - Fulton2006 ER - TY - JOUR AU - Wyss, A. R. PY - 1987 DA - 1987// TI - The walrus auditory region and monophyly of pinnipeds JO - Am Mus Novitates VL - 2871 ID - Wyss1987 ER - TY - CHAP AU - Wyss, A. R. AU - Flynn, J. J. ED - Szalay, F. Z. ED - Novacek, M. J. ED - McKenna, M. C. PY - 1993 DA - 1993// TI - A phylogenetic analysis and definition of the Carnivora BT - Mammal phylogeny: Placentals PB - Springer-Verlag CY - New York ID - Wyss1993 ER - TY - JOUR AU - Berta, A. AU - Wyss, A. R. PY - 1994 DA - 1994// TI - Pinniped phylogeny JO - Proc San Diego Soc Nat Hist VL - 29 ID - Berta1994 ER - TY - BOOK AU - Rice, D. W. PY - 1998 DA - 1998// TI - Marine Mammals of the World: Systematics and Distribution PB - Society for Marine Mammalogy, Special Publication No. 4 CY - Lawrence, KA ID - Rice1998 ER - TY - JOUR AU - Repenning, C. A. AU - Ray, C. E. PY - 1977 DA - 1977// TI - The origin of the Hawaiian monk seal JO - Proc Biol Soc Washington VL - 89 ID - Repenning1977 ER - TY - JOUR AU - de Muizon, C. PY - 1982 DA - 1982// TI - Phocid phylogeny and dispersal JO - Ann S Afr Mus VL - 89 ID - de Muizon1982 ER - TY - JOUR AU - Wyss, A. R. PY - 1988 DA - 1988// TI - Evidence from flipper structure for a single origin of pinnipeds JO - Nature VL - 334 ID - Wyss1988 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Gittleman, J. L. AU - Purvis, A. PY - 1999 DA - 1999// TI - Building large trees by combining phylogenetic information: a complete phylogeny of the extant Carnivora (Mammalia) JO - Biol Rev VL - 74 ID - Bininda-Emonds1999 ER - TY - JOUR AU - Fyler, C. A. AU - Reeder, T. W. AU - Berta, A. AU - Antonelis, G. AU - Aguilar, A. AU - Androukaki, E. PY - 2005 DA - 2005// TI - Historical biogeography and phylogeny of monachine seals (Pinnipedia: Phocidae) based on mitochondrial and nuclear DNA data JO - J Biogeog VL - 32 ID - Fyler2005 ER - TY - JOUR AU - King, J. E. PY - 1966 DA - 1966// TI - Relationships of the hooded and elephant seals (genera Cystophora and Mirounga) JO - J Zool London VL - 148 ID - King1966 ER - TY - JOUR AU - Palo, J. U. AU - Väinölä, R. PY - 2006 DA - 2006// TI - The enigma of the landlocked Baikal and Caspian seals addressed through phylogeny of phocine mitochondrial sequences JO - Biol J Linnean Soc VL - 88 ID - Palo2006 ER - TY - BOOK AU - Reidman, M. PY - 1990 DA - 1990// TI - The Pinnipeds: Seals, Sea Lions, and Walruses PB - University of California Press CY - Berkley, CA ID - Reidman1990 ER - TY - CHAP AU - Reynolds, J. E. AU - Odell, D. K. AU - Rommel, S. A. ED - Reynolds, J. E. ED - Rommel, S. A. PY - 1999 DA - 1999// TI - Marine mammals of the world BT - Biology of marine mammals PB - Smithsonian Institution Press CY - Washington, DC ID - Reynolds1999 ER - TY - JOUR AU - Repenning, C. A. AU - Tedford, R. H. PY - 1977 DA - 1977// TI - Otarioid seals of the Neogene: classification, historical zoogeography, and temporal correlation of the sea lions and walruses from the North Pacific region JO - US Geol Surv Prof Pap VL - 992 ID - Repenning1977 ER - TY - BOOK AU - Brunner, S. PY - 2000 DA - 2000// TI - Cranial morphometrics of fur seals and sea lions (Family: Otariidae) – systematics, geographic variation and growth PB - Veterinary Anatomy and Pathology, University of Sydney CY - Sydney, Australia ID - Brunner2000 ER - TY - JOUR AU - Brunner, S. PY - 2003 DA - 2003// TI - Fur seals and sea lions (Otariidae): identification of species and taxonomic review JO - Syst Biodiv VL - 1 ID - Brunner2003 ER - TY - JOUR AU - Wynen, L. P. AU - Goldsworthy, S. D. AU - Insley, S. J. AU - Adams, M. AU - Bickman, J. W. AU - Francis, J. AU - Gallo, J. P. AU - Hoelzel, A. R. AU - Majluf, P. AU - White, R. W. G. AU - Slade, S. PY - 2001 DA - 2001// TI - Phylogenetic relationships within the eared seals (Otariidae: Carnivora): implications for the historical biogeography of the family JO - Mol Phylogenet Evol VL - 21 ID - Wynen2001 ER - TY - JOUR AU - Goldsworthy, S. D. AU - Boness, D. J. AU - Fleischer, R. C. PY - 1999 DA - 1999// TI - Mate choice among sympatric fur seals: female preference for conphenotypic males JO - Behav Ecol Sociobiol VL - 45 ID - Goldsworthy1999 ER - TY - JOUR AU - Brunner, S. PY - 2002 DA - 2002// TI - A probable hybrid sea lion – Zalophus californianus X Otaria bryonia JO - J Mamm VL - 83 ID - Brunner2002 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Gittleman, J. L. AU - Kelly, C. K. PY - 2001 DA - 2001// TI - Flippers versus feet: comparative trends in aquatic and non-aquatic carnivores JO - J Animal Ecol VL - 70 ID - Bininda-Emonds2001 ER - TY - JOUR AU - Diniz-Filho, J. A. F. AU - Tôrres, N. M. PY - 2002 DA - 2002// TI - Phylogenetic comparative methods and the geographic range size-body size relationship in new world terrestrial Carnivora JO - Evol Ecol VL - 16 ID - Diniz-Filho2002 ER - TY - JOUR AU - Ferguson, S. H. AU - Larivière, S. PY - 2002 DA - 2002// TI - Can comparing life histories help conserve carnivores? JO - Animal Conserv VL - 5 ID - Ferguson2002 ER - TY - JOUR AU - Ferguson, S. H. AU - Larivière, S. PY - 2004 DA - 2004// TI - Are long penis bones an adaptation to high latitude snowy environments? JO - Oikos VL - 105 ID - Ferguson2004 ER - TY - JOUR AU - Larivière, S. AU - Ferguson, S. H. PY - 2002 DA - 2002// TI - On the evolution of the mammalian baculum: vaginal friction, prolonged intromission, and induced ovulation? JO - Mamm Rev VL - 32 ID - Larivière2002 ER - TY - JOUR AU - Larivière, S. AU - Ferguson, S. H. PY - 2003 DA - 2003// TI - Evolution of induced ovulation in North American carnivores JO - J Mamm VL - 84 ID - Larivière2003 ER - TY - JOUR AU - Nunn, C. L. AU - Gittleman, J. L. AU - Antonovics, J. PY - 2003 DA - 2003// TI - A comparative study of white blood cell counts and disease risk in carnivores JO - Proc Royal Soc B Biol Sci VL - 270 ID - Nunn2003 ER - TY - JOUR AU - Cardillo, M. AU - Purvis, A. AU - Sechrest, W. AU - Gittleman, J. L. PY - 2004 DA - 2004// TI - Human population density and extinction risk in the world's carnivores JO - PLoS Biol VL - 2 ID - Cardillo2004 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Gittleman, J. L. PY - 2000 DA - 2000// TI - Are pinnipeds functionally different from fissiped carnivores? The importance of phylogenetic comparative analyses JO - Evolution Int J Org Evolution VL - 54 ID - Bininda-Emonds2000 ER - TY - JOUR AU - Lindenfors, P. AU - Tullberg, B. S. AU - Biuw, M. PY - 2002 DA - 2002// TI - Phylogenetic analyses of sexual selection and sexual size dimorphism in pinnipeds JO - Behav Eco Sociobiol VL - 52 ID - Lindenfors2002 ER - TY - JOUR AU - Schulz, T. M. AU - Bowen, W. D. PY - 2005 DA - 2005// TI - The evolution of lactation strategies in pinnipeds: a phylogenetic analysis JO - Ecol Monogr VL - 75 ID - Schulz2005 ER - TY - JOUR AU - Ferguson, S. H. PY - 2006 DA - 2006// TI - The influences of environment, mating habitat, and predation on evolution of pinniped lactation strategies JO - J Mamm Evol VL - 13 ID - Ferguson2006 ER - TY - JOUR AU - Ferguson, S. H. AU - Higdon, J. W. PY - 2006 DA - 2006// TI - How seals divide up the world: environment, life history, and conservation JO - Oecologia VL - 150 ID - Ferguson2006 ER - TY - JOUR AU - Baum, B. R. PY - 1992 DA - 1992// TI - Combining trees as a way of combining data sets for phylogenetic inference, and the desirability of combining gene trees JO - Taxon VL - 41 ID - Baum1992 ER - TY - JOUR AU - Ragan, M. A. PY - 1992 DA - 1992// TI - Phylogenetic inference based on matrix representation of trees JO - Mol Phylogenet Evol VL - 1 ID - Ragan1992 ER - TY - JOUR AU - Lapointe, F. -. J. AU - Kirsch, J. A. W. AU - Hutcheon, J. M. PY - 1999 DA - 1999// TI - Total evidence, consensus, and bat phylogeny: a distance based approach JO - Mol Phylogenet Evol VL - 11 ID - Lapointe1999 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. PY - 2003 DA - 2003// TI - Novel versus unsupported clades: assessing the qualitative support for clades in MRP supertrees JO - Syst Biol VL - 52 ID - Bininda-Emonds2003 ER - TY - JOUR AU - Price, S. A. AU - Bininda-Emonds, O. R. P. AU - Gittleman, J. L. PY - 2005 DA - 2005// TI - A complete phylogeny of the whales, dolphins and even-toed hoofed mammals (Cetartiodactyla) JO - Biol Rev VL - 80 ID - Price2005 ER - TY - BOOK AU - Berta, A. AU - Sumich, J. L. PY - 1999 DA - 1999// TI - Marine mammals: evolutionary biology PB - Academic Press CY - San Diego ID - Berta1999 ER - TY - JOUR AU - Repenning, C. A. PY - 1976 DA - 1976// TI - Adaptive evolution of sea lions and walruses JO - Syst Zool VL - 25 ID - Repenning1976 ER - TY - CHAP AU - Repenning, C. A. AU - Ray, C. E. AU - Grigorescu, D. ED - Gray, J. ED - Boucot, A. J. PY - 1979 DA - 1979// TI - Pinniped biogeography BT - Historical Biogeography, Plate Tectonics, and the Changing Environment PB - Oregon State University Press CY - Corvallis, OR ID - Repenning1979 ER - TY - JOUR AU - Miyazaki, S. AU - Horikawa, H. AU - Kohno, N. AU - Hirota, K. AU - Kimura, M. AU - Hasegawa, Y. AU - Tomida, Y. AU - Barnes, L. G. AU - Ray, C. E. PY - 1995 DA - 1995// TI - Summary of the fossil record of pinnipeds from Japan, and comparisons with that from the eastern North Pacific JO - Island Arc VL - 3 ID - Miyazaki1995 ER - TY - JOUR AU - Mitchell, E. D. AU - Tedford, R. H. PY - 1973 DA - 1973// TI - The Enaliarctinae: a new group of extinct aquatic Carnivora and a consideration of the origin of the Otariidae JO - Bull Am Mus Nat Hist VL - 151 ID - Mitchell1973 ER - TY - JOUR AU - Berta, A. PY - 1991 DA - 1991// TI - New Enaliarctos (Pinnipedimorpha) from the Oligocene and Miocene of Oregon and the role of "enaliarctids" in pinniped phylogeny JO - Smithson Contrib Paleobiol VL - 69 ID - Berta1991 ER - TY - JOUR AU - Koretsky, I. A. AU - Sanders, A. E. PY - 1997 DA - 1997// TI - Pinniped bones from the Late Oligocene of South Carolina: the oldest known seal (Carnivora: Phocidae) [abstract] JO - J Vert Paleo VL - 17 ID - Koretsky1997 ER - TY - CHAP AU - Koretsky, I. A. AU - Sanders, A. E. ED - Emry, R. J. PY - 2002 DA - 2002// TI - Paleontology of the Late Oligocene Ashley and Chandler Bridge Formations of South Carolina, 1: Paleogene pinniped remains; the oldest known seal (Carnivora: Phocidae) BT - Cenozoic Mammals of Land and Sea: Tributes to the Career of Clayton E. Ray. Smith Cont Paleo ID - Koretsky2002 ER - TY - JOUR AU - Barnes, L. G. AU - Domning, D. P. AU - Ray, C. E. PY - 1985 DA - 1985// TI - Status of studies on fossil marine mammals JO - Mar Mammal Sci VL - 1 ID - Barnes1985 ER - TY - JOUR AU - Costa, D. P. PY - 1993 DA - 1993// TI - The relationship between reproductive and foraging energetics and the evolution of the Pinnipedia JO - Symp Zool Soc London VL - 66 ID - Costa1993 ER - TY - CHAP AU - Repenning, C. A. AU - Peterson, R. S. AU - Hubbs, C. L. ED - Burt, W. H. PY - 1971 DA - 1971// TI - Contributions to the systematics of the southern fur seals, with particular reference to the Juan Fernandez and Guadalupe species BT - Antarctic Pinnipedia PB - American Geophysical Union CY - Washington, DC ID - Repenning1971 ER - TY - JOUR AU - Stirling, I. AU - Warneke, R. M. PY - 1971 DA - 1971// TI - Implications of a comparison of the airborne vocalizations and some aspects of the behaviour of the two Australian fur seals, Arctocephalus spp., on the evolution and present taxonomy of the genus JO - Australian J Zool VL - 19 ID - Stirling1971 ER - TY - JOUR AU - Trillmich, F. AU - Majluf, P. PY - 1981 DA - 1981// TI - First observations on colony structure, behaviour and vocal repertoire of the South American fur seal (Arctocephalus australis Zimmermann, 1783) in Peru JO - Zeitschrift Saugetierkunde VL - 46 ID - Trillmich1981 ER - TY - CHAP AU - Goldsworthy, S. D. AU - Pemberton, D. AU - Warneke, R. M. ED - Hindell, M. ED - Kemper, K. PY - 1997 DA - 1997// TI - Field identification of Australian and New Zealand fur seals, Arctocephalus ssp., based on external features BT - Marine Mammal Research in the Southern Hemisphere PB - Surrey Beatty and Sons CY - Sydney, Australia ID - Goldsworthy1997 ER - TY - JOUR AU - King, J. E. PY - 1954 DA - 1954// TI - The otariid seals of the Pacific coast of America JO - British Mus (Nat Hist) Zool Publ VL - 2 ID - King1954 ER - TY - BOOK AU - Scheffer, V. B. PY - 1958 DA - 1958// TI - Seals, Sea Lions and Walruses – A Review of the Pinnipedia PB - Stanford University Press CY - Stanford, CA ID - Scheffer1958 ER - TY - CHAP AU - Sivertsen, E. PY - 1954 DA - 1954// TI - A survey of the eared seals (family Otariidae) with remarks on the Antarctic seals collected by M/K "Norvegia" in 1928–1929 BT - Scientific results of the Norwegian Antarctic expeditions 1927–1928 (et seq.) PB - Det Norske Videnskaps – Akademii Oslo CY - Oslo ID - Sivertsen1954 ER - TY - JOUR AU - de Muizon, C. PY - 1978 DA - 1978// TI - Arctocephalus (Hydrarctos) lomasiensis, subgen, nov. et nov. sp., un nouvel Otariidae du Mio-Pliocene de Sacaco (Perou) JO - Bull de l'Institut Francais des Etudes Andines VL - 7 ID - de Muizon1978 ER - TY - JOUR AU - de Muizon, C. AU - De Vries, T. J. PY - 1985 DA - 1985// TI - Geology and paleontology of late Cenozoic marine deposits in the Sacaco area (Peru) JO - Sonderdruck aus Geologische Rundschau VL - 74 ID - de Muizon1985 ER - TY - JOUR AU - Kim, K. C. AU - Repenning, C. A. AU - Morejohn, G. V. PY - 1975 DA - 1975// TI - Specific antiquity of the sucking lice and evolution of otariids seals JO - Rapp P-V Reun Con Internat Explor Mer VL - 169 ID - Kim1975 ER - TY - JOUR AU - Drehmer, C. J. AU - Ribeiro, A. M. PY - 1998 DA - 1998// TI - A temporal bone of an Otariidae (Mammalia: Pinnipedia) from the late Pleistocene of Rio Grandedo Sul State, Brazil JO - Geociencias VL - 3 ID - Drehmer1998 ER - TY - BOOK AU - King, J. E. PY - 1983 DA - 1983// TI - Seals of the World PB - University of Queensland Press CY - St. Lucia ID - King1983 ER - TY - JOUR AU - Burns, J. J. PY - 1970 DA - 1970// TI - Remarks on the distribution and natural history of pagophilic pinnipeds in the Bering and Chukchi seas JO - J Mammal VL - 51 ID - Burns1970 ER - TY - JOUR AU - McLaren, I. A. PY - 1975 DA - 1975// TI - A speculative overview of phocid evolution JO - Rapp P-v Réun Cons Int Explor Mer VL - 169 ID - McLaren1975 ER - TY - JOUR AU - Ray, C. E. PY - 1977 DA - 1977// TI - Phoca wymani and other Tertiary seals (Mammalia: Phocidae) described from the Eastern Seaboard of North America JO - Smith Cont Paleo VL - 28 ID - Ray1977 ER - TY - JOUR AU - Arnason, U. AU - Xu, X. F. AU - Gullberg, A. PY - 1996 DA - 1996// TI - The 'Phoca standard': an external molecular reference for calibrating recent evolutionary divergences JO - J Mol Evol VL - 43 ID - Arnason1996 ER - TY - JOUR AU - Sasaki, H. AU - Numachi, K. AU - Grachev, M. A. PY - 2003 DA - 2003// TI - The origin and genetic relationships of the Baikal Seal, Phoca sibirica, by restriction analysis of mitochondrial DNA JO - Zool Sci VL - 20 ID - Sasaki2003 ER - TY - JOUR AU - Haug, G. H. AU - Tiedemann, R. PY - 1998 DA - 1998// TI - Effect of the formation of the Isthmus of Panama on Atlantic Ocean thermohaline circulation JO - Nature VL - 393 ID - Haug1998 ER - TY - JOUR AU - Mercer, J. M. AU - Roth, V. L. PY - 2003 DA - 2003// TI - The effects of Cenozoic global change on squirrel phylogeny JO - Science VL - 299 ID - Mercer2003 ER - TY - JOUR AU - Miya, M. AU - Nishida, M. PY - 1997 DA - 1997// TI - Speciation in the open ocean JO - Nature VL - 389 ID - Miya1997 ER - TY - JOUR AU - Ray, C. E. PY - 1976 DA - 1976// TI - Geography of phocid evolution JO - Syst Zool VL - 25 ID - Ray1976 ER - TY - JOUR AU - Slade, R. W. AU - Moritz, C. AU - Hoelzel, A. R. AU - Burton, H. R. PY - 1998 DA - 1998// TI - Molecular population genetics of the southern elephant seal Mirounga leonina JO - Genetics VL - 149 ID - Slade1998 ER - TY - BOOK AU - Harvey, P. H. AU - Pagel, M. D. PY - 1991 DA - 1991// TI - The comparative method in evolutionary biology PB - Oxford University Press CY - Oxford, UK ID - Harvey1991 ER - TY - JOUR AU - Garland, T. AU - Midford, P. E. AU - Ives, A. R. PY - 1999 DA - 1999// TI - An introduction to phylogenetically based statistical methods, with a new method for confidence intervals on ancestral values JO - Am Zool VL - 39 ID - Garland1999 ER - TY - JOUR AU - Polly, P. D. PY - 2001 DA - 2001// TI - Paleontology and the comparative method: ancestral node reconstruction versus observed node values JO - Am Nat VL - 157 ID - Polly2001 ER - TY - JOUR AU - Fisher, D. O. AU - Owens, I. P. F. PY - 2004 DA - 2004// TI - The comparative method in conservation biology JO - Trends Ecol Evol VL - 19 ID - Fisher2004 ER - TY - JOUR AU - Isaac, N. J. B. AU - Turvey, S. T. AU - Collen, B. AU - Waterman, C. AU - Baillie, J. E. M. PY - 2007 DA - 2007// TI - Mammals on the EDGE: conservation priorities based on threat and phylogeny JO - PLoS ONE VL - 2 ID - Isaac2007 ER - TY - JOUR AU - Bull, J. J. AU - Huelsenbeck, J. P. AU - Cunningham, C. W. AU - Swofford, D. L. AU - Waddel, P. J. PY - 1993 DA - 1993// TI - Partitioning and combining data in phylogenetic analysis JO - Syst Biol VL - 42 ID - Bull1993 ER - TY - CHAP AU - Bininda-Emonds, O. R. P. PY - 2007 DA - 2007// TI - Perl scripts GenBankStrip, seqCleaner, relDate, ChronoGrapher BT - Programs distributed by the author PB - Institut für Spezielle Zoologie und Evolutionsbiologie CY - University of Jena ID - Bininda-Emonds2007 ER - TY - JOUR AU - Thompson, J. D. AU - Higgins, D. G. AU - Gibson, T. J. PY - 1994 DA - 1994// TI - CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice JO - Nucleic Acids Res VL - 22 ID - Thompson1994 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. PY - 2005 DA - 2005// TI - transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences JO - BMC Bioinform VL - 6 ID - Bininda-Emonds2005 ER - TY - BOOK PY - 1993 DA - 1993// TI - Mammal species of the world: a taxonomic and geographic reference PB - Smithsonian Institution Press CY - Washington, DC ID - ref94 ER - TY - JOUR AU - Sanderson, M. J. AU - Donoghue, M. J. AU - Piel, W. AU - Eriksson, T. PY - 1994 DA - 1994// TI - TreeBASE: a prototype database of phylogenetic analyses and an interactive tool for browsing the phylogeny of life JO - Amer J Bot VL - 81 ID - Sanderson1994 ER - TY - JOUR AU - Daubin, V. AU - Gouy, M. AU - Perrière, G. PY - 2001 DA - 2001// TI - Bacterial molecular phylogeny using supertree approach JO - Genome Inform VL - 12 ID - Daubin2001 ER - TY - CHAP AU - Bininda-Emonds, O. R. P. AU - Stamatakis, A. ED - Hodkinson, T. R. ED - Parnell, J. A. N. PY - 2006 DA - 2006// TI - Taxon sampling versus computational complexity and their impact on obtaining the Tree of Life BT - Reconstructing the Tree of Life: Taxonomy and Systematics of Species Rich Taxa PB - CRC Press CY - Boca Raton, FL ID - Bininda-Emonds2006 ER - TY - JOUR AU - Felsenstein, J. PY - 1981 DA - 1981// TI - Evolutionary trees from DNA sequences: a maximum likelihood approach JO - J Mol Evol VL - 17 ID - Felsenstein1981 ER - TY - JOUR AU - Mossel, E. AU - Vigoda, E. PY - 2005 DA - 2005// TI - Phylogenetic MCMC algorithms are misleading on mixtures of trees JO - Science VL - 309 ID - Mossel2005 ER - TY - JOUR AU - Kubatko, L. S. AU - Degnan, J. H. PY - 2007 DA - 2007// TI - Inconsistency of phylogenetic estimates from concatenated data under coalescence JO - Syst Biol VL - 56 ID - Kubatko2007 ER - TY - JOUR AU - Jeffroy, O. AU - Brinkmann, H. AU - Delsuc, F. AU - Phillippe, H. PY - 2006 DA - 2006// TI - Phylogenomics: the beginning of incongruence? JO - Trends Genet VL - 22 ID - Jeffroy2006 ER - TY - JOUR AU - Gatesy, J. AU - Baker, R. H. AU - Hayashi, C. PY - 2004 DA - 2004// TI - Inconsistencies in arguments for the supertree approach: supermatrices versus supertrees of Crocodylia JO - Syst Biol VL - 53 ID - Gatesy2004 ER - TY - JOUR AU - Gatesy, J. AU - Matthee, C. A. AU - DeSalle, R. AU - Hayashi, C. PY - 2002 DA - 2002// TI - Resolution of a supertree/supermatrix paradox JO - Syst Biol VL - 51 ID - Gatesy2002 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Jones, K. E. AU - Price, S. A. AU - Grenyer, R. AU - Cardillo, M. AU - Habib, M. AU - Purvis, A. AU - Gittleman, J. L. PY - 2003 DA - 2003// TI - Supertrees are a necessary not-so-evil, a comment on Gatesy et al JO - Syst Biol VL - 52 ID - Bininda-Emonds2003 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. PY - 2004 DA - 2004// TI - Trees versus characters and the supertree/supermatrix "paradox" JO - Syst Biol VL - 53 ID - Bininda-Emonds2004 ER - TY - JOUR AU - Guindon, S. AU - Gsacuel, O. PY - 2003 DA - 2003// TI - A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood JO - Syst Biol VL - 52 ID - Guindon2003 ER - TY - CHAP AU - Nylander, J. A. A. PY - 2004 DA - 2004// TI - MrAIC.pl BT - Program distributed by the author PB - Evolutionary Biology Centre CY - Uppsala University ID - Nylander2004 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Beck, R. M. D. AU - Purvis, A. PY - 2005 DA - 2005// TI - Getting to the roots of matrix representation JO - Syst Biol VL - 54 ID - Bininda-Emonds2005 ER - TY - JOUR AU - Felsenstein, J. PY - 1985 DA - 1985// TI - Confidence limits on phylogenies: an approach using the bootstrap JO - Evol VL - 39 ID - Felsenstein1985 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Sanderson, M. J. PY - 2001 DA - 2001// TI - Assessment of the accuracy of matrix representation with parsimony supertree construction JO - Syst Biol VL - 50 ID - Bininda-Emonds2001 ER - TY - CHAP AU - Swofford, D. L. PY - 2002 DA - 2002// BT - PAUP* Phylogenetic analysis using parsimony (*and other methods) v.4 PB - Sinauer Associates CY - Sunderland, MA ID - Swofford2002 ER - TY - JOUR AU - Bremer, K. PY - 1988 DA - 1988// TI - The limits of amino acid sequence data in angiosperm phylogenetic reconstruction JO - Evol VL - 42 ID - Bremer1988 ER - TY - STD TI - Beck RDM, Bininda-Emonds ORP, Cardillo M, Liu F-GR, Purvis A: A higher-level MRP supertree of mammals. BMC Evol Biol. 2006, 6 (93): ID - ref113 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models JO - Bioinform VL - 22 ID - Stamatakis2006 ER - TY - CHAP AU - Stamatakis, A. PY - 2006 DA - 2006// TI - Phylogenetic models of rate heterogeneity: a high performance computing perspective BT - Proceedings of 20th IEEE/ACM International Parallel and Distributed Processing Symposium (IPDPS2006), High Performance Computational Biology Workshop, Proceedings on CD, Rhodos, Greece ID - Stamatakis2006 ER - TY - JOUR AU - Ronquist, F. AU - Huelsenbeck, J. P. PY - 2003 DA - 2003// TI - MrBayes 3: Bayesian phylogenetic inference under mixed models JO - Bioinform VL - 19 ID - Ronquist2003 ER - TY - JOUR AU - Bininda-Emonds, O. R. P. AU - Cardillo, M. AU - Jones, K. E. AU - MacPhee, R. D. E. AU - Beck, R. M. D. AU - Grenyer, R. AU - Price, S. AU - Vos, R. A. AU - Gittleman, J. L. AU - Purvis, A. PY - 2007 DA - 2007// TI - The delayed rise of present-day mammals JO - Nature VL - 446 ID - Bininda-Emonds2007 ER - TY - JOUR AU - Purvis, A. PY - 1995 DA - 1995// TI - A composite estimate of primate phylogeny JO - Philos Trans R Soc Lond B VL - 348 ID - Purvis1995 ER - TY - JOUR AU - Posada, D. AU - Crandall, K. PY - 1998 DA - 1998// TI - MODELTEST: testing the model of DNA substitution JO - Bioinform VL - 14 ID - Posada1998 ER - TY - JOUR AU - Graur, D. AU - Martin, W. PY - 2004 DA - 2004// TI - Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision JO - Trends Genet VL - 20 ID - Graur2004 ER - TY - JOUR AU - Renner, S. S. PY - 2005 DA - 2005// TI - Relaxed molecular clocks for dating historical plant dispersal events JO - Trends Pl Sci VL - 10 ID - Renner2005 ER - TY - JOUR AU - Kishino, H. AU - Thorne, J. L. AU - Bruno, W. J. PY - 2001 DA - 2001// TI - Performance of a divergence time estimation method under a probabilistic model of rate evolution JO - Mol Biol Evol VL - 18 ID - Kishino2001 ER - TY - JOUR AU - Thorne, J. L. AU - Kishino, H. AU - Painter, I. S. PY - 1998 DA - 1998// TI - Estimating the rate of evolution of the rate of molecular evolution JO - Mol Biol Evol VL - 15 ID - Thorne1998 ER - TY - BOOK AU - Rutschmann, F. PY - 2005 DA - 2005// TI - Bayesian molecular dating using PAML/multidivtime: a step-by-step manual PB - University of Zurich CY - Switzerland ID - Rutschmann2005 ER - TY - JOUR AU - Yang, Z. PY - 1997 DA - 1997// TI - PAML: a program package for phylogenetic analysis by maximum likelihood JO - Comput Appl Biosci VL - 13 ID - Yang1997 ER - TY - JOUR AU - Wain, H. M. AU - Lush, M. AU - Ducluzeau, F. AU - Povey, S. PY - 2002 DA - 2002// TI - Genew: the human gene nomenclature database JO - Nucleic Acids Res VL - 30 ID - Wain2002 ER - TY - BOOK AU - McKenna, M. C. AU - Bell, S. K. PY - 1997 DA - 1997// TI - Classification of Mammals above the Species Level PB - Columbia University Press CY - New York ID - McKenna1997 ER - TY - JOUR AU - de Muizon, C. PY - 1982 DA - 1982// TI - Phocid phylogeny and dispersal JO - Annals S Afr Mus VL - 89 ID - de Muizon1982 ER -