Table 1 Species and Genbank accession numbers [46] of opsin nucleotide sequences and deduced amino acids used in phylogenetic analyses.
From: Visual pigments in a living fossil, the Australian lungfish Neoceratodus forsteri
| Opsin | Common name reference in Fig. 3 | Species | Genbank accession number |
|---|---|---|---|
| Invertebrate Rh4 | Fruit Fly | Drosophila melanogaster | NM_057353 |
| Rh1 | Common frog | Rana temporaria | U59920 |
| Salamander | Ambystoma tigrinum | U36574 | |
| Lungfish | Neoceratodus forsteri | EF526295 | |
| Coelacanth | Latimeria chalumnae | AF131253 | |
| Cavefish | Astyanax fasciatus | U12328 | |
| Goldfish | Carassius auratus | L11863 | |
| Rh2 | Green anole | Anolis carolinensis | AF134189 |
| Italian wall lizard | Podarcis sicula | AY941829 | |
| Lungfish | Neoceratodus forsteri | EF526296 | |
| Coelacanth | Latimeria chalumnae | AF131258 | |
| Cavefish | Astyanax fasciatus | AH004622 | |
| Goldfish | Carassius auratus | L11865 | |
| SWS2 | Salamander | Ambystoma tigrinum | AF038946 |
| Bullfrog | Rana catesbiana | AB010085 | |
| Lungfish | Neoceratodus forsteri | EF526299 | |
| Goldfish | Carassius auratus | L11864 | |
| Cavefish | Astyanax fasciatus | AH007939 | |
| SWS1 | Green anole | Anolis carolinensis | AF134192 |
| Salamander | Ambystoma tigrinum | AF038948 | |
| Lungfish | Neoceratodus forsteri | EF526298 | |
| Goldfish | Carassius auratus | D85863 | |
| Bluefin killifish | Lucania goodei | AY296735 | |
| LWS | African clawed frog | Xenopus laevis | U90895 |
| Salamander | Ambystoma tigrinum | AF038947 | |
| Lungfish | Neoceratodus forsteri | EF526297 | |
| Goldfish | Carassius auratus | L11867 | |
| Zebrafish | Danio rerio | NM_001002443 | |
| Lamprey | Geotria australis | AY366491 |