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Table 2 In silico identification of orthologues and chromosomal locations of genes contiguous with imprinted genes.

From: The evolution of imprinting: chromosomal mapping of orthologues of mammalian imprinted domains in monotreme and marsupial mammals

Platypus Contig Predicted gene Human orthologue Human location Chicken assignment Opossum assignment
1q Ultracontig378 Ox_plat42681 LGMN 14q32.12 5 1
  Ox_plat497848 High E-value - - -
  Nov499641/Nov5433 GOLGA5 14q32.12 5 1
  Nov5434 CHGA 14q32.12 5 1
  Ox_plat52244 ITPK1 14q32.12 5 1
  Ox_plat7773 MOAP1 14q32.13 5 -
  Ox_plat1058 C14orf130 14q32.13 5 1
  Nov0444/Ox_plat88666 BTBD7 14q32.13 5 1
  Ox-plat454053/Nov11241/Ox_plat35285 KIAA1409 14q32.13 5 1
  Ox_plat548259 High E-value - - -
  Nov11242/Ox_plat367667 ASB2 14q32.13 5 1
  Nov11243 High E-value 14q32.13 - -
  Nov11244/Ox_plat4560 OTUB2 14q32.13 5 1
  Nov11245 KIAA1622 14q32.13 5 1
  Ox_plat116474 KIAA1622 14q32.13 5 1 insertion
  Nov11246/Ox_plat42680 High E-value - - - insertion
  Nov12040/Ox_plat411980 SERPINA11 14q32.13 5 - insertion
  Nov12038/Ox_plat468381/Nov12037 High E-value - - - insertion
  Nov12036 GSC 14q32.13 5 1 insertion
  Nov12034/Ox_plat475598 DICER1 14q32.13 5 1
  Nov12033 CLMN 14q32.13 5 -
  Nov9154 C14orf49 14q32.13 5 1
  Ox_plat409095 High E-value - - -
  Nov65921/Nov6591 BDKRB2 14q32.2 5 1
  Nov65905/Ox_plat42182/Nov6589;6588 C14orf103 14q32.2 5 1
  Nov6588 C14orf129 14q32.2 5 1
  Nov13812/Ox_plat6298 PAPOLA 14q32.2 5 -
  Nov12141/Ox_plat6576 VRK1 14q32.2 5 1
  Nov14770 BCL11B 14q32.2 5 1
  Nov14773 KRT19 17q21.2 27 2
  Nov14774/Nov3153/Ox_plat403179 SETD3 14q32.2 5 1
  Nov2410 KIAA1822 14q32.2 5 1
  Nov7692 CYP46A1 14q32.2 5 -
  Nov7691 LOC91461 14q32.2 5 -
  Nov4045/Ox_plat43367 EML1 14q32.2 5 1
  Nov12424/Ox_plat123106 DEGS2 14q32.2 5 1
  Nov5723/Ox_plat43391 YY1 14q32.2 5 1
  Nov5724 SLC25A29 14q32.2 5 1
  Nov5726 C14orf68 14q32.2 5 1
  Nov5727/Ox_plat494845 WARS 14q32.2 5 1
  Nov5730 High E-value - - -
* Nov5731 DLK1 14q32.2 5 1
  Nov5732/Ox_plat43477 DNAH1 3p21.1 12 6
  Nov5733/Ox_plat522828 DYNC1H1 14q32.32 5 1
  Nov5734/Ox_plat6302 HSP90AA1 14q32.32 3 -
  Nov5735/Ox_plat461283 WDR20 14q32.32 5 1
  Nov5736/Ox_plat549051/Ox_plat5738/Ox_plat456837 RAGE 14q32.32 5 1
  Nov5740/Ox_plat526165 KIAA0329 14q32.32 5 1
  Nov5741 ANKRD9 14q32.32 5 1
  Nov9609 KIAA1446 14q32.2 5 -
8p Contig16 Ox_plat6649 CYP24A 20q13.2 20 1
  Ox_plat6759 PFDN 20q13.2 20 -
  Ox_plat44306 DOK 20q13.2 20 -
  Ox_plat1864 CBLN4 20q13.31 20 1
  Ox_plat373291 High E-value - - -
  Ox_plat6760 CSTF1 20q13.31 20 1
  Ox_plat485472 C20orf32 20q13.31 20 1
  Ox_plat509072 C20orf43 20q13.31 20 1
  Ox_plat21038/Ox_plat49662 High E-value - - -
  Ox_plat50570 BMP7 20q13.31 20 1
  Ox_plat6664 SPO11 20q13.32 20 1
  Ox_plat6762 RAE1 20q13.32 20 1
  Ox_plat501210 RBM30 20q13.32 20 -
  Ox_plat21169 CTCFL 20q13.32 20 1
  Ox_plat364767 PCK1 20q13.32 20 1
  Ox_plat50577 TMEPAI 20q13.32 20 1
  Nov 9262 TMEPAI 20q13.32 20 1
  Ox_plat21326 C20orf80 20q13.32 20 -
  Ox_plat21104 RAB22A 20q13.32 20 1
  Ox_plat21317 C20orf80 20q13.32 20 -
  Ox_plat69044 PPP4R1L 20q13.32 20 1
  Ox_plat50567 VAPB 20q13.32 20 1
  Ox_plat499610 STX16 20q13.32 20 -
  Nov9272 Fam38A 16q24.3 11 1
  Ox_plat499488 C20orf45 20q13.32 20 1
* Nov9275 GNAS 20q13.32 20 1
  Ox_plat6777 TUBB1 20q13.32 - 1
  Ox_plat21080 High E-value 20q13.32 - -
  Nov9282 C20orf174 20q13.32 20 1
  Ox_plat4456 PHACTR3 20q13.33 20 1
  Ox_plat454388 CDH26 20q13.33 - 1
4p Contig107 Ox_plat400863 CUL1 7q36.1 2 8
  Ox_plat10731 EZH2 7q36.1 2 3
  Nov0280 PDIA4 7q36.1 2 8
  Nov0281 High E-value - - -
  Ox_plat49897 COBL 7p12.1 2 6
* Ox_plat451754/Nov0283 GRB10 7p12.1 2 6
  Nov0284 DDC 7p12.2 2 6
  Nov0285 FIGNL1 7p12.2 - 6
  Ox_plat403769/Nov0286 IKZF1 7p12.2 2 6
  Nov0287 ZPBP 7p12.2 2 6
  Nov0288 High E-value - - -
  Ox_plat4844817/Ox_plat467096 High E-value - - -
2 Contig1301 Nov7295 SLC22A2 6q25.3 3 2
* Q9N1T1 IGF2R 6q25.3 3 2
2q Contig538 Nov6345/Nov6346/Ox_plat486528 SLC38A1 12q13.11 1 8
* Nov6348 SLC38A4 12q13.11 1 8
18p Contig121 Ox_plat15397 UBE3A 15q11.2 1 7
  Ox_plat498667 MGC26733 2q11.2 1 -
  Ox_plat3315 TMEM131 2q11.2 1 7
  Ox_plat59493 TMEM47 Xp21.2 1 4
  Nov7105/Nov7106/Ox_plat390388 High E-value - 1  
  Ox_plat85743 CXorf22 Xp21.2 1 4
  Ox_plat472396 PRRG1 Xp21.2 1 4
  Ox_plat1731 XK Xp11.4 1 4
  Nov7111 CYBB Xp11.4 1 4
  Ox_plat85753 DYNLT3 Xp11.4 1 4
  Ox_plat514733 SYTL5 Xp11.4 1 4
  Ox_plat7251 SRPX Xp11.4 1 4
  Ox_plat375200 RPGR Xp11.4 1 4
  Ox_plat1440 OTC Xp11.4 1 4
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