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Table 4 Compositional features of tunicate mitochondrial genomes

From: The mitochondrial genome of Phallusia mammillata and Phallusia fumigata (Tunicata, Ascidiacea): high genome plasticity at intra-genus level

 

G+C%

T/G ratio

%T

%G

%A

%C

GC-skew

AT-skew

 

Alla

P3b

All

P3

All

P3

All

P3

All

P3

All

P3

All

P3

All

P3

Ascidiacea

                

   Phallusia mammillata

47.1

50.7

1.18

1.12

33.3

32.1

28.2

28.6

19.5

17.2

18.9

22.1

0.20

0.13

-0.26

-0.30

   Phallusia fumigata

46.8

52.2

1.07

0.86

33.3

30.7

31.1

35.5

19.9

17.1

15.7

16.7

0.33

0.36

-0.25

-0.29

   Ciona intestinalis sp. A

21.4

10.5

3.72

8.18

44.4

49.3

11.9

6.0

34.2

40.2

9.5

4.4

0.12

0.15

-0.13

-0.10

   Ciona intestinalis sp. B

23.5

15.5

3.47

5.95

43.5

46.9

12.5

7.9

33.1

37.6

10.9

7.7

0.07

0.01

-0.14

-0.11

   Ciona savignyi

22.7

13.0

3.22

4.99

45.3

51.9

14.1

10.4

32.0

35.2

8.7

2.6

0.24

0.61

-0.17

-0.19

   Halocynthia roretzi

31.7

24.1

1.90

2.38

44.0

50.0

23.2

21.0

24.3

26.0

8.5

3.1

0.46

0.74

-0.29

-0.32

Thaliacea

                

   Doliolum nationalis

39.0

39.4

1.64

1.74

32.8

30.9

20.0

17.8

28.3

29.7

19.0

21.7

0.03

-0.10

-0.07

-0.02

  1. a All: whole mitochondrial genome.
  2. b P3: third codon position of the 13 protein-coding genes.