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Table 2 Genome sources, genome size (Mb), number of KOGs assigned to each genome used in the study

From: Cophenetic correlation analysis as a strategy to select phylogenetically informative proteins: an example from the fungal kingdom

Genome

Strain

Genome size (Mb)

Number of KOG

Location

Ashbya gossypii

ATCC10895

7

2,592

Zoologisches Institut der Univ. Basel, Switzerland

Aspergillus fumigatus

Af293

30

3,182

TIGR

Aspergillus nidulans

FGSC A4

31

2,982

Broad Institute

Botritis cinerea

B05.10

38

3,191

Broad Institute

Caenorhabditis elegans

 

100

4,235

Welcome Trust Sanger Institute

Candida albicans

SC5314

16

2,636

Stanford University

Candida glabrata

CBS138

13

2,505

Genolevures

Candida guilliermondii

ATCC6260

12

2,750

Broad Institute

Candida lusitaniae

ATCC42720

16

2,742

Broad Institute

Chaetomium globosum

CBS148.51

36

3,144

Broad Institute

Coccidioides immitis

RS

28.78

3,137

Broad Institute

Coprinopsis cinereus

Okayama 7 (#130).

37.5

3,210

Broad Institute

Cryptococcus neoformans var. neoformans

JEC21

24

2,876

TIGR

Cryptococcus neoformans var. grubii

H99

20

3,074

Broad Institute

Debaryomyces hansenii

CBS767

12.22

2,760

Genolevures

Fusarium graminearum

PH-1 (NRRL 31084)

36

3,063

Broad Institute

Kluyveromyces lactis

CLIB210

10.69

2,596

Genolevures

Magnaporthe grisea

70-15

40

2,917

Broad Institute

Neurospora crassa

N-150

40

2,962

Broad Institute

Phanerochaete chrysosporium

RP78

30

2,945

DOE Joint Genome Institute

Rhizopus oryzae

RA99–880

40

3,310

Broad Institute

Saccharomyces bayanus

MCYC623

12

2,560

Stanford University

Saccharomyces castellii

NRRL Y-12630

10.2

2,390

Stanford University

Saccharomyces cerevisiae

RM11-1a

12

2,665

Broad Institute

Saccharomyces cerevisiae

S288c

12.07

2,668

Welcome Trust Sanger Institute

Saccharomyces kluyveri

NRRL Y-12651

10.2

1,747

Stanford University

Saccharomyces kudriavzevii

IFO1802

10.6

1,855

Stanford University

Saccharomyces mikatae

IFO1815

12

2,557

Stanford University

Saccharomyces paradoxus

NRRLY-17217

12

2,592

Stanford University

Saccharomyces cerevisiae

S288C

13

2,668

Stanford University

Schizosaccharomyces pombe

Urs Leupold 972 h-

14

2,762

Welcome Trust Sanger Institute

Sclerotinia sclerotiorum

1980

38

3,219

Broad Institute

Stagonospora nodorum

SN15

37.1

3,324

Broad Institute

Ustilago maydis

521

20

2,850

Broad Institute

Yarrowia lipolytica

CLIB99

20–21

2,699

Genolevures