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Table 2 Structural characteristics of the cDNAs encoding RPs of (A) Senegalese sole, Solea senegalensis and (B) Atlantic halibut, Hippoglossus hippoglossus. Lengths of coding regions, available 5'-UTR, 3'-UTR and poly (A) tail distances from poly(A) signals are indicated. Asterisk (*) denotes RPS coding sequences that were derived partially or completely from sequences present in GenBank. ND, not detected.

From: Comparative sequence analysis of the complete set of 40S ribosomal proteins in the Senegalese sole (Solea senegalensis Kaup) and Atlantic halibut (Hippoglossus hippoglossus L.) (Teleostei: Pleuronectiformes): phylogeny and tissue- and development-specific expression

(A)       
Gene # clones Accession # Coding region 5'-UTR 3'-UTR Poly(A) from poly(A)Signal
RPSa 15 AB291586 942 60 41 17
RPS2 24 AB291554 843 ND 39 12
RPS3 16 AB291555 738 9 84 17
RPS3a 13 AB291556 801 1 41 17
RPS4 7 AB291557 792 ND 57 17
RPS5 5 AB291558 612 29 62 37
RPS6 14 AB291559 750 23 39 22
RPS7 19 AB291560 585 51 36 13
RPS8 6 AB291561 627 ND 52 24
RPS9 6 AB291562 585 46 67 14
RPS10 9 AB291563 501 5 44 15
RPS11 7 AB291564 486 11 77 26
RPS12 16 AB291565 399 54 23 11
RPS13 4 AB291566 456 3 37 13
RPS14 2 AB291567 456 37 43 13
RPS15 4 AB291568 438 24 43 16
RPS15a 4 AB291569 393 34 38 16
RPS16 3 AB291570 441 18 39 14
RPS17 2 AB291571 405 21 39 11
RPS18 10 AB291572 459 5 39 15
RPS19 7 AB291573 444 5 22 22
RPS20 6 AB291574 360 98 54 24, 29
RPS21 4 AB291575 252 92 44 7
RPS23 5 AB291576 451 19 41 14
RPS24 9 AB291577 396 17 84 22
RPS25 5 AB291578 372 6 66 24
RPS26 6 AB291579 348 23 47 15
RPS27-1 7 AB291580 255 30 200 20
RPS27-2 1 AB291581 255 62 190 13
RPS27a 7 AB291582 471 77 36 19
RPS28 - AB291583 210 1 126 21
RPS29 1 AB291584 171 5 103 14
RPS30 8 AB291585 402 35 96 15
(B)       
Gene # clones Accession # Coding region 5'-UTR 3'-UTR Poly(A) from poly(A) Signal
RPSa 3 EB034722, EB039353 930 84 41 17
RPS2* 4 EB029719, EB030051 858 3 41 12
RPS3 2 EB034826, EB036030 741 25 126 12
RPS3a 6 EB035413, EB031090 801 23 41 14
RPS4 8 EB032598 792 41 57 20
RPS5 2 EB032359 EB036495 612 44 44 14
RPS6 2 EB031692, EB032095 750 40 33 14
RPS7 7 EB032431 585 37 33 14
RPS8 5 EB035663 627 24 39 11
RPS9 2 EB040140, EB032308 585 46 60 19
RPS10 2 EB031080 501 39 41 15
RPS11 5 EB035513 486 23 67 11
RPS12 1 EB029693 399 65 23 11
RPS13 1 EB034224 456 21 41 14
RPS14 3 EB040078 456 43 38 12
RPS15 3 EB036829, EB029855 438 25 42 18
RPS15a 2 EB036744 393 212 36 14
RPS16 1 EB038832 441 33 44 19
RPS17 1 EB035783 405 24 38 12
RPS18 6 EB035452 459 25 46 14
RPS19 2 EB030274 444 27 21 20
RPS20 2 EB038732 360 97 34 12
RPS21 3 EB030651 252 71 45 8
RPS23 5 EB035807 432 59 42 16, 21
RPS24 1 EB034880 399 34 81 19
RPS25 3 EB040606, EB040657 396 21 49 12
RPS26 7 EB036835 348 29 49 11
RPS27-1 4 EB039502 255 73 207 11
RPS27-2*   DN794622 255 52 192 8
RPS27-3 5 EB039943 255 73 >635 >451
RPS27-4 1 EB040256 249 84 >402 >74
RPS27a 4 EB038389 471 52 43 17
RPS28 1 EB037921 210 22 123 16
RPS29*   DN792676 171 30 >103 >15
RPS30 4 EB032882 402 59 96 15
  1. * GenBank sequences comprise final contig
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