Table 2 Structural characteristics of the cDNAs encoding RPs of (A) Senegalese sole, Solea senegalensis and (B) Atlantic halibut, Hippoglossus hippoglossus. Lengths of coding regions, available 5'-UTR, 3'-UTR and poly (A) tail distances from poly(A) signals are indicated. Asterisk (*) denotes RPS coding sequences that were derived partially or completely from sequences present in GenBank. ND, not detected.
(A) | ||||||
|---|---|---|---|---|---|---|
Gene | # clones | Accession # | Coding region | 5'-UTR | 3'-UTR | Poly(A) from poly(A)Signal |
RPSa | 15 | AB291586 | 942 | 60 | 41 | 17 |
RPS2 | 24 | AB291554 | 843 | ND | 39 | 12 |
RPS3 | 16 | AB291555 | 738 | 9 | 84 | 17 |
RPS3a | 13 | AB291556 | 801 | 1 | 41 | 17 |
RPS4 | 7 | AB291557 | 792 | ND | 57 | 17 |
RPS5 | 5 | AB291558 | 612 | 29 | 62 | 37 |
RPS6 | 14 | AB291559 | 750 | 23 | 39 | 22 |
RPS7 | 19 | AB291560 | 585 | 51 | 36 | 13 |
RPS8 | 6 | AB291561 | 627 | ND | 52 | 24 |
RPS9 | 6 | AB291562 | 585 | 46 | 67 | 14 |
RPS10 | 9 | AB291563 | 501 | 5 | 44 | 15 |
RPS11 | 7 | AB291564 | 486 | 11 | 77 | 26 |
RPS12 | 16 | AB291565 | 399 | 54 | 23 | 11 |
RPS13 | 4 | AB291566 | 456 | 3 | 37 | 13 |
RPS14 | 2 | AB291567 | 456 | 37 | 43 | 13 |
RPS15 | 4 | AB291568 | 438 | 24 | 43 | 16 |
RPS15a | 4 | AB291569 | 393 | 34 | 38 | 16 |
RPS16 | 3 | AB291570 | 441 | 18 | 39 | 14 |
RPS17 | 2 | AB291571 | 405 | 21 | 39 | 11 |
RPS18 | 10 | AB291572 | 459 | 5 | 39 | 15 |
RPS19 | 7 | AB291573 | 444 | 5 | 22 | 22 |
RPS20 | 6 | AB291574 | 360 | 98 | 54 | 24, 29 |
RPS21 | 4 | AB291575 | 252 | 92 | 44 | 7 |
RPS23 | 5 | AB291576 | 451 | 19 | 41 | 14 |
RPS24 | 9 | AB291577 | 396 | 17 | 84 | 22 |
RPS25 | 5 | AB291578 | 372 | 6 | 66 | 24 |
RPS26 | 6 | AB291579 | 348 | 23 | 47 | 15 |
RPS27-1 | 7 | AB291580 | 255 | 30 | 200 | 20 |
RPS27-2 | 1 | AB291581 | 255 | 62 | 190 | 13 |
RPS27a | 7 | AB291582 | 471 | 77 | 36 | 19 |
RPS28 | - | AB291583 | 210 | 1 | 126 | 21 |
RPS29 | 1 | AB291584 | 171 | 5 | 103 | 14 |
RPS30 | 8 | AB291585 | 402 | 35 | 96 | 15 |
(B) | ||||||
Gene | # clones | Accession # | Coding region | 5'-UTR | 3'-UTR | Poly(A) from poly(A) Signal |
RPSa | 3 | EB034722, EB039353 | 930 | 84 | 41 | 17 |
RPS2* | 4 | EB029719, EB030051 | 858 | 3 | 41 | 12 |
RPS3 | 2 | EB034826, EB036030 | 741 | 25 | 126 | 12 |
RPS3a | 6 | EB035413, EB031090 | 801 | 23 | 41 | 14 |
RPS4 | 8 | EB032598 | 792 | 41 | 57 | 20 |
RPS5 | 2 | EB032359 EB036495 | 612 | 44 | 44 | 14 |
RPS6 | 2 | EB031692, EB032095 | 750 | 40 | 33 | 14 |
RPS7 | 7 | EB032431 | 585 | 37 | 33 | 14 |
RPS8 | 5 | EB035663 | 627 | 24 | 39 | 11 |
RPS9 | 2 | EB040140, EB032308 | 585 | 46 | 60 | 19 |
RPS10 | 2 | EB031080 | 501 | 39 | 41 | 15 |
RPS11 | 5 | EB035513 | 486 | 23 | 67 | 11 |
RPS12 | 1 | EB029693 | 399 | 65 | 23 | 11 |
RPS13 | 1 | EB034224 | 456 | 21 | 41 | 14 |
RPS14 | 3 | EB040078 | 456 | 43 | 38 | 12 |
RPS15 | 3 | EB036829, EB029855 | 438 | 25 | 42 | 18 |
RPS15a | 2 | EB036744 | 393 | 212 | 36 | 14 |
RPS16 | 1 | EB038832 | 441 | 33 | 44 | 19 |
RPS17 | 1 | EB035783 | 405 | 24 | 38 | 12 |
RPS18 | 6 | EB035452 | 459 | 25 | 46 | 14 |
RPS19 | 2 | EB030274 | 444 | 27 | 21 | 20 |
RPS20 | 2 | EB038732 | 360 | 97 | 34 | 12 |
RPS21 | 3 | EB030651 | 252 | 71 | 45 | 8 |
RPS23 | 5 | EB035807 | 432 | 59 | 42 | 16, 21 |
RPS24 | 1 | EB034880 | 399 | 34 | 81 | 19 |
RPS25 | 3 | EB040606, EB040657 | 396 | 21 | 49 | 12 |
RPS26 | 7 | EB036835 | 348 | 29 | 49 | 11 |
RPS27-1 | 4 | EB039502 | 255 | 73 | 207 | 11 |
RPS27-2* | DN794622 | 255 | 52 | 192 | 8 | |
RPS27-3 | 5 | EB039943 | 255 | 73 | >635 | >451 |
RPS27-4 | 1 | EB040256 | 249 | 84 | >402 | >74 |
RPS27a | 4 | EB038389 | 471 | 52 | 43 | 17 |
RPS28 | 1 | EB037921 | 210 | 22 | 123 | 16 |
RPS29* | DN792676 | 171 | 30 | >103 | >15 | |
RPS30 | 4 | EB032882 | 402 | 59 | 96 | 15 |