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Table 1 Fit of demographic models

From: Population genetic estimation of the loss of genetic diversity during horizontal transmission of HIV-1

Demographic Model    Coalescent
Recipient Donor lnLk b AICc ESSd
env V1-V4     
Constant - a -4155.385 8310.77 523.85
Constant Constant -4144.993 8291.99 419.77
Exponential Constant -4103.717 8211.43 643.10
Logistic Constant -4090.154 8186.31 126.43
gag p24     
Constant - a -3118.180 6236.36 483.84
Constant Constant -3121.900 6245.80 440.34
Exponential Constant -3116.760 6237.52 378.33
Logistic Constant -3089.852 6185.70 202.69
  1. aPopulation size in Recipient constrained to be the same as that in Donor
  2. bNatural logarithm of the likelihood obtained from fitting the demographic model to the data
  3. cAkaike Information Criteria
  4. dEffective Sample Size (number of independent coalescent genealogies sampled from the posterior distribution)