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Figure 5 | BMC Evolutionary Biology

Figure 5

From: Analysis of transitions at two-fold redundant sites in mammalian genomes. Transition redundant approach-to-equilibrium (TREx) distance metrics

Figure 5

Histograms showing the frequency of f2Y and f2R values of mouse:rat intertaxa ortholog pairs. ci = confidence interval. (a). The histogram of observed data (f2Y) from all ortholog pairs (n>50), with the best fit Gaussian superimposed. μ = 0.88 (95% ci 0.877–0.884), σ = 0.040 (95% ci 0.039–0.042). (c). The theoretical histogram from the simulated data that is based on null hypothesis for f2Y of mouse:rat intertaxa ortholog pairs. μ = 0.88 (95% ci 0.878–0.882), σ = 0.030 (95% ci 0.028–0.031). (b). The histogram of observed data (f2R) from all ortholog pairs (n>50) with the best fit Gaussian superimposed. μ = 0.90 (95% ci 0.880–0.903), σ = 0.034 (95% ci 0.033–0.035). (d). The theoretical histogram from simulated data that is based on null hypothesis for f2R of mouse:rat intertaxa ortholog pairs. μ = 0.90 (95% ci 0.888–0.903), σ = 0.028 (95% ci 0.027–0.029). ci: confidence interval.

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