Skip to main content

Table 1 List of Su(var)3-9 Gene Sequences used.

From: The evolution of the histone methyltransferase gene Su(var)3-9 in metazoans includes a fusion with and a re-fission from a functionally unrelated gene

Species Abbre- viation Taxona Sequence determined by Intronsb Expression Genbank Accession Number
Schizosaccharomyces pombe Spo I [24] 0 cDNA AF061854
Dictyostelium discoideum Ddi II genome project ? EST EAL72127
Hydra magnipapillata Hma III genome project 2 EST CN626687
Homo sapiens Hsa1* IVa [13] 5 cDNA BC006238
Homo sapiens Hsa2* IVa genome project 5 cDNA AK027067
Mus musculus Mmu1* IVa [13] 5 cDNA AF019969
Mus musculus Mmu2* IVa [14] 5 cDNA AF149205
Gallus gallus Gga2* IVb genome project 5 cDNA AJ851535
Xenopus laevis Xla1* IVc genome project 5 cDNA BC070805
Xenopus laevis Xla2* IVc genome project 5 cDNA CR926249
Danio rerio Dre1a* IVd genome project 4 cDNA BC052225
Danio rerio Dre1b* IVd genome project 5 cDNA BC076417
Oryzias latipes Ola IVd genome project 4 n.d. (golw_scaffold3430)
Tetraodon nigroviridis Tni IVd genome project 4 n.d. CAAE01010335
Takifugu rubripes Tru IVd genome project 4 n.d. CAAB01003782
Ciona intestinalis Cin V genome project 7 cDNA AK114564
Araneus diadematus Adi VIa this study 0 RACE AM050256
Allacma fusca Afu VIb this study 6 RACE AM050257, AM050258
Lepisma saccharina Lsa VIc this study ? RACE AM050268
Enallagma cyathigerum Ecy VId this study 0 RACE AM050266
Forficula auricularia Fau VIe this study ? RACE AM050267
Acyrthosiphon pisum Api VIf this study 2 RACE AM050261, AM050262
Cercopis vulnerata Cvu VIf this study 0 RACE AM050264
Apis mellifera Ame VIg genome project, this study 0 RT-PCR AADG04005784, AM050259
Clytus arietis Car VIh [10] 0 RACE AJ290961
Leptinotarsa decemlineata Lde VIh [10] 0 RT-PCR AJ290965
Tribolium castaneum Tca VIh genome project 0 n.d. (contig856)
Scoliopterix libatrix Sli VIi [10] 0 RT-PCR AJ290959
Bombyx mori Bmo VIi genome project, this study 0 RT-PCR AM050263
Anopheles gambiae Aga VIj genome project 0 EST AAB01008888
Aedes aegypti Aae VIj genome project 0 EST (trace)
Drosophila melanogaster Dme VIj [9] 0 cDNA, RACE AJ290956
Drosophila simulans Dsi VIj genome project 0 n.d. (trace)
Drosophila yakuba Dya VIj genome project 0 n.d. AAEU01000306
Drosophila erecta Der VIj [10] 0 n.d. AJ290957
Drosophila ananassae Dan VIj genome project 0 n.d. (trace)
Drosophila pseudoobscura Dps VIj genome project 0 n.d. AADE01000627
Drosophila virilis Dvi VIj genome project 0 n.d. (trace)
Drosophila mojavensis Dmo VIj genome project 0 n.d. (trace)
Drosophila nasutoides Dna VIj this study 0 n.d. AM050265
  1. a Abbreviations: I, Fungi; II, Mycetozoa; III, Ctenophora; IV, Vertebrata (a, Mammalia; b, Aves; c, Amphibia; d, Teleostei); V, Urochordata; VI, Arthropoda (a, Chelicerata; b, Collembola; c, Thysanura; d, Odonata; e, Dermaptera; f, Hemiptera; g, Hymenoptera; h, Coleoptera; i Lepidopdera; j, Diptera)
  2. b inside of Su(var)3-9-specific sequences; *two gene copies in one species; n.d., not determined.