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Table 1 The FORS-D values of breakpoints of inserted recombined fragments occurred in China HIV-1 B'/C intersubtype recombinants.

From: The key role for local base order in the generation of multiple forms of China HIV-1 B'/C intersubtype recombinants

No. fragment#

Recombinant strains

Subtype B'* (kcal/mol)

Subtype C* (kcal/mol)

  

Left (5'-)

Right (3'-)

Left (5'-)

Right (3'-)

1

CRF07, HH069, HH086

3.04

-8.12

-7.07

-8.63

2

CRF08

-1.52

-6.38

-7.00

-9.20

3

CRF07

-19.88

-10.43

-14.15

-15.27

4

HH069

3.48

-10.43

-3.76

-15.27

5

CRF08, HH029

-3.97

-13.29

-5.09

-18.91

6

HH069

-7.15

-13.29

-9.62

-18.91

7

CRF07, HH086

-1.07

-13.29

-0.37

-18.91

8

CRF07

-0.92

-5.56

-1.32

-8.10

9

CRF07, CRF08, HH069, HH086

-9.94

-5.19

-5.97

-6.02

10

DH003, DH015

-0.90

-9.30

-2.98

-3.88

11

DH012

-0.90

-10.70

-2.98

-3.67

12

DH012

4.13

-2.93

-5.32

-7.27

13

DH015

-7.15

-13.29

-9.62

-18.91

14

DH016

-19.88

-10.43

-14.15

-15.27

15

DH008

-19.88

-3.97

-14.15

-5.09

  1. # The fragment numbers were consistent with those of Fig. 1D and 2B. * The FORS-D values of breakpoints were calculated as described in the Methods. The average FORS-D values of subtype B' and C HIV-1 genome were -3.17 and -3.78, respectively. The value of < -3.17 (subtype B') or < -3.78 (subtype C) represents the region with higher negative FORS-D value.