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Table 1 SULT1A3-related LCRs

From: Phylogenomic approaches to common problems encountered in the analysis of low copy repeats: The sulfotransferase 1A gene family example

LCR Name*

Chromosome

Strand

Start

End

Length

% Identity†

A

chr18p

+

11605429

11633851

28422

97.8

B

chr16p

+

11985022

12003971

18949

97.6

C

chr16p

-

14747420

14753000

5580

94.8

D

chr16p

-

14766628

14792117

25489

96.5

E

chr16p

-

14805750

14832437

26687

96.6

F

chr16p

-

14996007

15072649

76642

96.9

G

chr16p

+

15161625

15185467

23842

95.6

H

chr16p

-

15417052

15453865

36813

95.9

I

chr16p

-

16394409

16416404

21995

96.4

J

chr16p

+

16437719

16461029

23310

96.5

K

chr16p

+

18371484

18394809

23325

96.4

L

chr16p

+

18414255

18434928

20673

96.4

M

chr16p

-

18834216

18904410

70194

96.5

N

chr16p

+

18962854

18969729

6875

95.2

O

chr16p

+

21376182

21480283

104101

97.8

P

chr16p

+

21808293

21910109

101816

98.3

Q

chr16p

-

22414809

22523008

108199

97.1

R

chr16p

+

28316465

28341127

24662

97.8

S

chr16p

+

28427424

28467064

39640

97.3

1A1

chr16p

+

28481970

28490644

8674

86.0

1A2

chr16p

+

28494950

28502357

7407

86.6

T

chr16p

-

28621035

28630803

9768

97.7

U

chr16p

-

28692200

28714506

22306

98.1

V

chr16p

-

28800873

28828646

27773

97.7

W

chr16p

-

29084138

29108487

24349

97.8

X

chr16p

+

29426409

29498137

71728

97.6

1A4

chr16p

+

29498152

29644489

146337

99.1

1A3

chr16p

+

30236110

30388351

152241

100

Y

chr16q

+

69784235

69818803

34568

96.2

Z

chr16q

+

70016088

70061019

44931

97.4

AA

chr16q

-

74188141

74209430

21289

97.4

  1. *LCR names are as in Figure 1. †Percent identity is relative to the 1A3 LCR.