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Table 4 Combined analysis Combined log likelihoods over all genes under the nonstationary (NONSTA), stationary (STA), and reversible (REV) models. If NONSTA or STA places the root correctly, the corresponding log likelihood appears in bold.

From: Rooting a phylogenetic tree with nonreversible substitution models

group root placement NONSTA STA REV
  human -21536 -21743 -21765
1 chimp -21551 -21746 -21765
  gorilla -21470 -21744 -21765
  human -26266 -26566 -26589
2 chimp -26270 -26567 -26589
  gorilla -26223 -26566 -26589
  orangutan -26172 -26566 -26589
  interior -26241 -26563 -26589
  human -53049 -53387 -53427
  mouse -53029 -53393 -53427
3 chicken -52848 -53388 -53427
  frog -52682 -53382 -53427
  interior -52833 -53391 -53427