| | Rate | nmC | mC | Chi2 |
|---|
per 1_0_57
| 0.045 | 4/226 (1.77%) | 11/174 (6.32%) | * |
can 28_B_45
| 0.188 | 24/226 (10.62%) | 37/174 (21.26%) | ** |
can 39_3_53
| 0.080 | 11/226 (4.87%) | 19/174 (10.92%) | * |
can 44_4_54
| 0.061 | 12/226 (5.31%) | 16/174 (9.20%) | ns |
can 36_1_53
| 0.090 | 10/226 (4.42%) | 26/174 (14.94% | *** |
can 90_2_62
| 0.055 | 0/226 (0.00%) | 2/174 (1.15%) | ns |
- Rate: Kimura 2-parameter distance from the reconstructed ancestral sequence. nmC: Number of C>T substitutions / number of non-methylated cytosines on both DNA strands of the reconstructed ancestral ITS sequence of Ilex. mC: Number of C>T substitutions / number of methylated cytosines on both DNA strands of the reconstructed ancestral ITS sequence of Ilex. The corresponding ratios of C>T substitutions are indicated between brackets. Chi2: Chi-square homogeneity test between expected and observed C>T substitutions at methylated cytosines (ns: non significant; *, ** and ***: significant at 0.05, 0.01 and 0.001 levels, respectively).
