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Table 1 Data summary of sequencing results for F. heteroclitus AHR1, AHR2, and AHRR from seven locations along the Atlantic coast of the United States

From: Genetic variation at aryl hydrocarbon receptor (AHR) loci in populations of Atlantic killifish (Fundulus heteroclitus) inhabiting polluted and reference habitats

 

AHR1

AHR2

AHRR

Population

N

π

Hap

Hd

SNPs

N

π

Hap

Hd

SNPs

N

π

Hap

Hd

SNPs

NBH

52

0.0054

10

0.836

22

38

0.0026

18

0.902

22

     

SC

52

0.0057

12

0.792

24

48

0.0024

23

0.916

25

     

JB

14

0.0046

14

1

18

14

0.0009

10

0.923

7

26

0.0031

10

0.812

15

FP

30

0.0043

21

0.945

23

14

0.0015

11

0.956

16

24

0.0037

18

0.971

29

PC

26

0.0055

20

0.975

23

14

0.0020

8

0.912

12

22

0.0046

21

0.966

30

SH

18

0.0058

15

0.974

24

18

0.0015

11

0.928

12

20

0.0038

17

0.984

24

YC

10

0.0026

5

0.844

11

2

0

1

0

0

16

0.0033

10

0.925

20

Summary

202

0.0061

76

0.948

31

148

0.0024

65

0.970

29

108

0.0042

65

0.976

38

  1. Note: N = number of alleles sequenced. π = nucleotide diversity. Hap = number of haplotypes found. Hd = Haplotype diversity. SNPs = number of single nucleotide polymorphisms found. No AHRR sequences were obtained from NBH or SC fish. The “Summary” line (bold text) includes the total number of distinct haplotypes and SNPs across all populations. SNP and haplotype counts for AHR1 include sequences from exon 10 only. The unique haplotypes for each AHR locus are available in the Dryad repository, at doi:10.5061/dryad.t2888.
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BMC Ecology and Evolution

ISSN: 2730-7182

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