TY - BOOK AU - McKenzie, J. A. PY - 1996 DA - 1996// TI - Ecological and Evolutionary Aspects of Insecticide Resistance PB - R.G. Landes Company and Academic Press CY - Austin, TX ID - McKenzie1996 ER - TY - JOUR AU - Taylor, M. AU - Feyereisen, R. PY - 1996 DA - 1996// TI - Molecular biology and evolution of resistance to toxicants JO - Mol Biol Evol VL - 13 ID - Taylor1996 ER - TY - JOUR AU - Li, X. AU - Schuler, M. A. AU - Berenbaum, M. R. PY - 2007 DA - 2007// TI - Molecular mechanisms of metabolic resistance to synthetic and natural xenobiotics JO - Annual Rev Entomol VL - 52 ID - Li2007 ER - TY - JOUR AU - Wirgin, I. AU - Waldman, J. R. PY - 2004 DA - 2004// TI - Resistance to contaminants in North American fish populations JO - Mut Res VL - 552 ID - Wirgin2004 ER - TY - CHAP AU - van Veld, P. A. AU - Nacci, D. E. ED - Di Giulio, R. T. ED - Hinton, D. E. PY - 2007 DA - 2007// TI - Chapter 13. Toxicity Resistance BT - The Toxicology of Fishes PB - Francis CY - Boca Raton ID - van Veld2007 ER - TY - JOUR AU - Nacci, D. E. AU - Champlin, D. AU - Jayaraman, S. PY - 2010 DA - 2010// TI - Adaptation of the estuarine fish Fundulus heteroclitus (Atlantic killifish) to polychlorinated biphenyls (PCBs) JO - Estuar Coast Shelf Sci VL - 33 ID - Nacci2010 ER - TY - JOUR AU - Billiard, S. M. AU - Meyer, J. N. AU - Wassenberg, D. M. AU - Hodson, P. V. AU - Di Giulio, R. T. PY - 2008 DA - 2008// TI - Nonadditive effects of PAHs on Early Vertebrate Development: mechanisms and implications for risk assessment JO - Toxicol Sci VL - 105 ID - Billiard2008 ER - TY - JOUR AU - Goldstone, H. M. AU - Stegeman, J. J. PY - 2006 DA - 2006// TI - Molecular mechanisms of 2,3,7,8-tetrachlorodibenzo-p-dioxin cardiovascular embryotoxicity JO - Drug Metab Rev VL - 38 ID - Goldstone2006 ER - TY - JOUR AU - Cook, P. M. AU - Robbins, J. A. AU - Endicott, D. D. AU - Lodge, K. B. AU - Guiney, P. D. AU - Walker, M. K. AU - Zabel, E. W. AU - Peterson, R. E. PY - 2003 DA - 2003// TI - Effects of aryl hydrocarbon receptor-mediated early life stage toxicity on lake trout populations in Lake Ontario during the 20th century JO - Environ Sci Technol VL - 37 ID - Cook2003 ER - TY - JOUR AU - Burnett, K. G. AU - Bain, L. J. AU - Baldwin, W. S. AU - Callard, G. V. AU - Cohen, S. AU - Di Giulio, R. T. AU - Evans, D. H. AU - Gómez-Chiarri, M. AU - Hahn, M. E. AU - Hoover, C. A. AU - Karchner, S. I. AU - Katoh, F. AU - MacLatchy, D. L. AU - Marshall, W. S. AU - Meyer, J. N. AU - Nacci, D. E. AU - Oleksiak, M. F. AU - Rees, B. B. AU - Singer, T. P. AU - Stegeman, J. J. AU - Towle, D. W. AU - Veld, P. A. V. AU - Vogelbein, W. K. AU - Whitehead, A. AU - Winn, R. N. AU - Crawford, D. L. PY - 2007 DA - 2007// TI - Fundulus as the premier teleost model in environmental biology: Opportunities for new insights using genomics JO - Compar Biochem Physiol Part D: Genom Proteom VL - 2 ID - Burnett2007 ER - TY - JOUR AU - Powers, D. A. AU - Schulte, P. M. PY - 1998 DA - 1998// TI - Evolutionary adaptations of gene structure and expression in natural populations in relation to a changing environment: a multidisciplinary approach to address the million-year saga of a small fish JO - J Exper Zool VL - 282 ID - Powers1998 ER - TY - JOUR AU - Schulte, P. M. PY - 2001 DA - 2001// TI - Environmental adaptations as windows on molecular evolution JO - Compar Biochem Physiol - Part B: Biochem Mol Biol VL - 128 ID - Schulte2001 ER - TY - JOUR AU - Weis, J. S. AU - Weis, P. PY - 1989 DA - 1989// TI - Tolerance and stress in a polluted environment JO - Bioscience VL - 39 ID - Weis1989 ER - TY - JOUR AU - Prince, R. AU - Cooper, K. R. PY - 1995 DA - 1995// TI - Comparisons of the effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin on chemically impacted and nonimpacted subpopulations of Fundulus heteroclitus: I: TCDD toxicity JO - Environ Toxicol Chem VL - 14 ID - Prince1995 ER - TY - JOUR AU - Elskus, A. A. AU - Monosson, E. AU - McElroy, A. E. AU - Stegeman, J. J. AU - Woltering, D. S. PY - 1999 DA - 1999// TI - Altered CYP1A expression in Fundulus heteroclitus adults and larvae: a sign of pollutant resistance? JO - Aquat Toxicol VL - 45 ID - Elskus1999 ER - TY - JOUR AU - Arzuaga, X. AU - Elskus, A. PY - 2010 DA - 2010// TI - Polluted-site killifish (Fundulus heteroclitus) embryos are resistant to organic pollutant-mediated induction of CYP1A activity, reactive oxygen species, and heart deformities JO - Environ Toxicol Chem VL - 29 ID - Arzuaga2010 ER - TY - JOUR AU - Prince, R. AU - Cooper, K. R. PY - 1995 DA - 1995// TI - Comparisons of the effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin on chemically impacted and nonimpacted subpopulations of Fundulus heteroclitus: II: Metabolic considerations JO - Environ Toxicol Chem VL - 14 ID - Prince1995 ER - TY - JOUR AU - Van Veld, P. A. AU - Westbrook, D. J. PY - 1995 DA - 1995// TI - Evidence for depression of cytochrome P4501A in a population of chemically resistant mummichog (Fundulus heteroclitus) JO - Environ Sci VL - 3 ID - Van Veld1995 ER - TY - JOUR AU - Meyer, J. N. AU - Nacci, D. E. AU - Di Giulio, R. T. PY - 2002 DA - 2002// TI - Cytochrome P4501A (CYP1A) in killifish (Fundulus heteroclitus): heritability of altered expression and relationship to survival in contaminated sediments JO - Toxicol Sci VL - 68 ID - Meyer2002 ER - TY - JOUR AU - Ownby, D. R. AU - Newman, M. C. AU - Mulvey, M. AU - Vogelbein, W. K. AU - Unger, M. A. AU - Arzayus, L. F. PY - 2002 DA - 2002// TI - Fish (Fundulus heteroclitus) populations with different exposure histories differ in tolerance of creosote-contaminated sediments JO - Environ Toxicol Chem VL - 21 ID - Ownby2002 ER - TY - JOUR AU - Weaver, G. PY - 1984 DA - 1984// TI - PCB contamination in and around New Bedford, Mass JO - Environ Sci Technol VL - 18 ID - Weaver1984 ER - TY - JOUR AU - Nacci, D. AU - Coiro, L. AU - Champlin, D. AU - Jayaraman, S. AU - McKinney, R. AU - Gleason, T. AU - Munns, W. R. AU - Specker, J. L. AU - Cooper, K. PY - 1999 DA - 1999// TI - Adaptation of wild populatons of the estuarine fish Fundulus heteroclitus to persistent environmental contaminants JO - Mar Biol VL - 134 ID - Nacci1999 ER - TY - JOUR AU - Bello, S. M. AU - Franks, D. G. AU - Stegeman, J. J. AU - Hahn, M. E. PY - 2001 DA - 2001// TI - Acquired resistance to aryl hydrocarbon receptor agonists in a population of Fundulus heteroclitus from a marine Superfund site: In vivo and in vitro studies on the induction of xenobiotic-metabolizing enzymes JO - Toxicol Sci VL - 60 ID - Bello2001 ER - TY - JOUR AU - Nacci, D. E. AU - Champlin, D. AU - Coiro, L. AU - McKinney, R. AU - Jayaraman, S. PY - 2002 DA - 2002// TI - Predicting the occurrence of genetic adaptation to dioxinlike compounds in populations of the estuarine fish Fundulus heteroclitus JO - Environ Toxicol Chem VL - 21 ID - Nacci2002 ER - TY - CHAP AU - Bello, S. M. PY - 1999 DA - 1999// TI - Ph.D. Thesis BT - Characterization of resistance to halogenated aromatic hydrocarbons in a population of Fundulus heteroclitus from a marine superfund site PB - Woods Hole Oceanographic Institution/Massachusetts Institute of Technology CY - Woods Hole ID - Bello1999 ER - TY - JOUR AU - Whitehead, A. AU - Pilcher, W. AU - Champlin, D. AU - Nacci, D. PY - 2012 DA - 2012// TI - Common mechanism underlies repeated evolution of extreme pollution tolerance JO - Proc Royal Soc B VL - 279 ID - Whitehead2012 ER - TY - CHAP AU - Woods, R. AU - Hoffman, A. ED - Kammenga, J. ED - Laskowski, R. PY - 2000 DA - 2000// TI - Chapter 9: Evolution in Toxic Environments: Quantitative Versus Major Gene Approaches BT - Demography in Ecotoxicology ID - Woods2000 ER - TY - JOUR AU - Macnair, M. R. PY - 1991 DA - 1991// TI - Why the evolution of resistance to anthropogenic toxins normally involves major gene changes: the limits to natural selection JO - Genetica VL - 84 ID - Macnair1991 ER - TY - JOUR AU - McMillan, A. M. AU - Bagley, M. J. AU - Jackson, S. A. AU - Nacci, D. E. PY - 2006 DA - 2006// TI - Genetic diversity and structure of an estuarine fish (Fundulus heteroclitus) indigenous to sites associated with a highly contaminated urban harbor JO - Ecotoxicology VL - 15 ID - McMillan2006 ER - TY - JOUR AU - Brown, B. AU - Chapman, R. PY - 1991 DA - 1991// TI - Gene flow and mitochondrial DNA variation in the killifish: Fundulus heteroclitus JO - Evolution VL - 45 ID - Brown1991 ER - TY - JOUR AU - Hoffmann, A. A. AU - Willi, Y. PY - 2008 DA - 2008// TI - Detecting genetic responses to environmental change JO - Nat Rev Genet VL - 9 ID - Hoffmann2008 ER - TY - JOUR AU - Cohen, S. PY - 2002 DA - 2002// TI - Strong positive selection and habitat-specific amino acid substitution patterns in MHC from an estuarine fish under intense pollution stress JO - Mol Biol Evol VL - 19 ID - Cohen2002 ER - TY - JOUR AU - Roark, S. A. AU - Nacci, D. AU - Coiro, L. AU - Champlin, D. AU - Guttman, S. I. PY - 2005 DA - 2005// TI - Population genetic structure of a nonmigratory estuarine fish (Fundulus heteroclitus) across a strong gradient of polychlorinated biphenyl contamination JO - Environ Toxicol Chem VL - 24 ID - Roark2005 ER - TY - JOUR AU - Dalziel, A. C. AU - Rogers, S. M. AU - Schulte, P. M. PY - 2009 DA - 2009// TI - Linking genotypes to phenotypes and fitness: how mechanistic biology can inform molecular ecology JO - Mol Ecol VL - 18 ID - Dalziel2009 ER - TY - JOUR AU - Fernandez-Salguero, P. AU - Hilbert, D. M. AU - Rudikoff, S. AU - Ward, J. M. AU - Gonzalez, F. J. PY - 1996 DA - 1996// TI - Aryl-hydrocarbon receptor-deficient mice are resistant to 2,3,7,8-tetrachlorodibenzo-p-dioxin-induced toxicity JO - Toxicol Appl Pharmacol VL - 140 ID - Fernandez-Salguero1996 ER - TY - JOUR AU - Mimura, J. AU - Yamashita, K. AU - Nakamura, K. AU - Morita, M. AU - Takagi, T. AU - Nakao, K. AU - Ema, M. AU - Sogawa, K. AU - Yasuda, M. AU - Katsuki, M. PY - 1997 DA - 1997// TI - Loss of teratogenic response to 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) in mice lacking the Ah (dioxin) receptor JO - Genes Cells VL - 2 ID - Mimura1997 ER - TY - JOUR AU - Prasch, A. L. AU - Teraoka, H. AU - Carney, S. A. AU - Dong, W. AU - Hiraga, T. AU - Stegeman, J. J. AU - Heideman, W. AU - Peterson, R. E. PY - 2003 DA - 2003// TI - Aryl Hydrocarbon Receptor 2 mediates 2,3,7,8-Tetrachlorodibenzo-p-dioxin developmental toxicity in zebrafish JO - Toxicol Sci VL - 76 ID - Prasch2003 ER - TY - JOUR AU - Jönsson, M. E. AU - Jenny, M. J. AU - Woodin, B. R. AU - Hahn, M. E. AU - Stegeman, J. J. PY - 2007 DA - 2007// TI - Role of AHR2 in the expression of novel cytochrome P450 1 family genes, cell cycle genes, and morphological defects in developing zebra fish exposed to 3,3′,4,4′,5-pentachlorobiphenyl or 2,3,7,8-tetrachlorodibenzo-p-dioxin JO - Toxicol Sci VL - 100 ID - Jönsson2007 ER - TY - JOUR AU - Hahn, M. E. AU - Karchner, S. I. AU - Shapiro, M. A. AU - Perera, S. A. PY - 1997 DA - 1997// TI - Molecular evolution of two vertebrate aryl hydrocarbon (dioxin) receptors (AHR1 and AHR2) and the PAS family JO - Proc Natl Acad Sci USA VL - 94 ID - Hahn1997 ER - TY - JOUR AU - Powell, W. H. AU - Karchner, S. I. AU - Bright, R. AU - Hahn, M. E. PY - 1999 DA - 1999// TI - Functional diversity of vertebrate ARNT proteins: Identification of ARNT2 as the predominant form of ARNT in the marine teleost, Fundulus heteroclitus JO - Arch Biochem Biophys VL - 361 ID - Powell1999 ER - TY - JOUR AU - Karchner, S. I. AU - Powell, W. H. AU - Hahn, M. E. PY - 1999 DA - 1999// TI - Identification and functional characterization of two highly divergent aryl hydrocarbon receptors (AHR1 and AHR2) in the teleost Fundulus heteroclitus: Evidence for a novel subfamily of ligand-binding basic helix-loop-helix Per-ARNT-Sim (bHLH-PAS) factors JO - J Biol Chem VL - 274 ID - Karchner1999 ER - TY - JOUR AU - Karchner, S. I. AU - Franks, D. G. AU - Powell, W. H. AU - Hahn, M. E. PY - 2002 DA - 2002// TI - Regulatory interactions among three members of the vertebrate aryl hydrocarbon receptor family: AHR repressor, AHR1, and AHR2 JO - J Biol Chem VL - 277 ID - Karchner2002 ER - TY - JOUR AU - Hahn, M. E. PY - 1998 DA - 1998// TI - Mechanisms of innate and acquired resistance to dioxin-like compounds JO - Rev Toxicol VL - 2 ID - Hahn1998 ER - TY - JOUR AU - Lavine, J. A. AU - Rowatt, A. J. AU - Klimova, T. AU - Whitington, A. J. AU - Dengler, E. AU - Beck, C. AU - Powell, W. H. PY - 2005 DA - 2005// TI - Aryl Hydrocarbon Receptors in the frog Xenopus laevis: Two AhR1 paralogs exhibit low affinity for 2,3,7,8-Tetrachlorodibenzo-p-Dioxin (TCDD) JO - Toxicol Sci VL - 88 ID - Lavine2005 ER - TY - JOUR AU - Karchner, S. I. AU - Franks, D. G. AU - Kennedy, S. W. AU - Hahn, M. E. PY - 2006 DA - 2006// TI - The molecular basis for differential dioxin sensitivity in birds: Role of the aryl hydrocarbon receptor JO - Proc Natl Acad Sci USA VL - 103 ID - Karchner2006 ER - TY - JOUR AU - Farmahin, R. AU - Manning, G. E. AU - Crump, D. AU - Wu, D. AU - Mundy, L. J. AU - Jones, S. P. AU - Hahn, M. E. AU - Karchner, S. I. AU - Giesy, J. P. AU - Bursian, S. J. PY - 2013 DA - 2013// TI - Amino acid sequence of the ligand binding domain of the aryl hydrocarbon receptor 1 (AHR1) predicts sensitivity of wild birds to effects of dioxin-like compounds JO - Toxicol Sci VL - 131 ID - Farmahin2013 ER - TY - JOUR AU - Poland, A. AU - Palen, D. AU - Glover, E. PY - 1994 DA - 1994// TI - Analysis of the four alleles of the murine aryl hydrocarbon receptor JO - Mol Pharmacol VL - 46 ID - Poland1994 ER - TY - JOUR AU - Pohjanvirta, R. AU - Wong, J. M. Y. AU - Li, W. AU - Harper, P. A. AU - Tuomisto, J. AU - Okey, A. B. PY - 1998 DA - 1998// TI - Point mutation in intron sequence causes altered carboxyl-terminal structure in the aryl hydrocarbon receptor of the most 2,3,7,8-tetrachlorodibenzo-p-dioxin-resistant rat strain JO - Mol Pharmacol VL - 54 ID - Pohjanvirta1998 ER - TY - JOUR AU - Sun, W. AU - Zhang, J. AU - Hankinson, O. PY - 1997 DA - 1997// TI - A mutation in the aryl hydrocarbon receptor (AHR) in a cultured mammalian cell line identifies a novel region of AHR that affects DNA binding JO - J Biol Chem VL - 272 ID - Sun1997 ER - TY - JOUR AU - Ema, M. AU - Ohe, N. AU - Suzuki, M. AU - Mimura, J. AU - Sogawa, K. AU - Ikawa, S. AU - Fujii-Kuriyama, Y. PY - 1994 DA - 1994// TI - Dioxin binding activities of polymorphic forms of mouse and human aryl hydrocarbon receptors JO - J Biol Chem VL - 269 ID - Ema1994 ER - TY - JOUR AU - Hahn, M. E. AU - Karchner, S. I. AU - Franks, D. G. AU - Merson, R. R. PY - 2004 DA - 2004// TI - Aryl hydrocarbon receptor polymorphisms and dioxin resistance in Atlantic killifish (Fundulus heteroclitus) JO - Pharmacogenetics VL - 14 ID - Hahn2004 ER - TY - JOUR AU - Weis, J. S. AU - Heber, M. AU - Weis, P. AU - Vaidya, S. PY - 1981 DA - 1981// TI - Methylmercury tolerance of killifish (Fundulus heteroclitus) embryos from a polluted vs non-polluted environment JO - Mar Biol VL - 65 ID - Weis1981 ER - TY - JOUR AU - Proestou, D. A. AU - Flight, P. AU - Champlin, D. AU - Nacci, D. PY - 2014 DA - 2014// TI - Targeted Approach to Identify Genetic Loci Associated with Evolved Dioxin Tolerance in Atlantic Killifish (Fundulus heteroclitus) JO - BMC Evol Biol VL - 14 ID - Proestou2014 ER - TY - JOUR AU - Hahn, M. E. PY - 2001 DA - 2001// TI - Dioxin toxicology and the aryl hydrocarbon receptor: Insights from fish and other non-traditional models JO - Mar Biotechnol VL - 3 ID - Hahn2001 ER - TY - JOUR AU - Hahn, M. E. PY - 2002 DA - 2002// TI - Aryl hydrocarbon receptors: diversity and evolution JO - Chem-Biol Inter VL - 141 ID - Hahn2002 ER - TY - JOUR AU - Chapman-Smith, A. AU - Lutwyche, J. K. AU - Whitelaw, M. L. PY - 2004 DA - 2004// TI - Contribution of the Per/Arnt/Sim (PAS) domains to DNA binding by the basic helix-loop-helix PAS transcriptional regulators JO - J Biol Chem VL - 279 ID - Chapman-Smith2004 ER - TY - JOUR AU - McGuire, J. AU - Okamoto, K. AU - Whitelaw, M. L. AU - Tanaka, H. AU - Poellinger, L. PY - 2001 DA - 2001// TI - Definition of a dioxin receptor mutant that is a constitutive activator of transcription: delineation of overlapping repression and ligand binding functions within the PAS domain JO - J Biol Chem VL - 276 ID - McGuire2001 ER - TY - JOUR AU - Whitehead, A. AU - Triant, D. A. AU - Champlin, D. AU - Nacci, D. PY - 2010 DA - 2010// TI - Comparative transcriptomics implicates mechanisms of evolved pollution tolerance in a killifish population JO - Mol Ecol VL - 19 ID - Whitehead2010 ER - TY - JOUR AU - Oleksiak, M. F. AU - Karchner, S. I. AU - Jenny, M. J. AU - Franks, D. G. AU - Mark Welch, D. B. AU - Hahn, M. E. PY - 2011 DA - 2011// TI - Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic Killifish (Fundulus heteroclitus) from a marine superfund site JO - BMC Genomics VL - 12 ID - Oleksiak2011 ER - TY - JOUR AU - Powell, W. H. AU - Bright, R. AU - Bello, S. M. AU - Hahn, M. E. PY - 2000 DA - 2000// TI - Developmental and tissue-specific expression of AHR1, AHR2, and ARNT2 in dioxin-sensitive and -resistant populations of the marine fish, Fundulus heteroclitus JO - Toxicol Sci VL - 57 ID - Powell2000 ER - TY - JOUR AU - Harbeitner, R. C. AU - Hahn, M. E. AU - Timme-Laragy, A. R. PY - 2013 DA - 2013// TI - Differential sensitivity to pro-oxidant exposure in two populations of killifish (Fundulus heteroclitus) JO - Ecotoxicology VL - 22 ID - Harbeitner2013 ER - TY - JOUR AU - Aluru, N. AU - Karchner, S. I. AU - Hahn, M. E. PY - 2011 DA - 2011// TI - Role of DNA methylation of AHR1 and AHR2 promoters in differential sensitivity to PCBs in Atlantic Killifish, Fundulus heteroclitus JO - Aquat Toxicol VL - 101 ID - Aluru2011 ER - TY - JOUR AU - Greytak, S. R. AU - Tarrant, A. M. AU - Nacci, D. AU - Hahn, M. E. AU - Callard, G. V. PY - 2010 DA - 2010// TI - Estrogen responses in killifish (Fundulus heteroclitus) from polluted and unpolluted environments are site- and gene-specific JO - Aquat Toxicol VL - 99 ID - Greytak2010 ER - TY - JOUR AU - Wirgin, I. AU - Roy, N. K. AU - Loftus, M. AU - Chambers, R. C. AU - Franks, D. G. AU - Hahn, M. E. PY - 2011 DA - 2011// TI - Mechanistic basis of resistance to PCBs in Atlantic Tomcod from the Hudson River JO - Science VL - 331 ID - Wirgin2011 ER - TY - JOUR AU - Thomas, R. S. AU - Penn, S. G. AU - Holden, K. AU - Bradfield, C. A. AU - Rank, D. R. PY - 2002 DA - 2002// TI - Sequence variation and phylogenetic history of the mouse Ahr gene JO - Pharmacogenetics VL - 12 ID - Thomas2002 ER - TY - JOUR AU - Harper, P. A. AU - Wong, J. M. Y. AU - Lam, M. S. M. AU - Okey, A. B. PY - 2002 DA - 2002// TI - Polymorphisms in the human AH receptor JO - Chem-Biol Inter VL - 141 ID - Harper2002 ER - TY - JOUR AU - Rowlands, C. J. AU - Staskal, D. F. AU - Gollapudi, B. AU - Budinsky, R. PY - 2010 DA - 2010// TI - The human AHR: identification of single nucleotide polymorphisms from six ethnic populations JO - Pharmacogen Genom VL - 20 ID - Rowlands2010 ER - TY - JOUR AU - Carver, L. A. AU - Hogenesch, J. B. AU - Bradfield, C. A. PY - 1994 DA - 1994// TI - Tissue specific expression of the rat Ah-receptor and ARNT mRNAs JO - Nucl Acids Res VL - 22 ID - Carver1994 ER - TY - JOUR AU - Dolwick, K. M. AU - Swanson, H. I. AU - Bradfield, C. A. PY - 1993 DA - 1993// TI - In vitro analysis of Ah receptor domains involved in ligand-activated DNA recognition JO - Proc Natl Acad Sci USA VL - 90 ID - Dolwick1993 ER - TY - JOUR AU - Fukunaga, B. N. AU - Probst, M. R. AU - Reiszporszasz, S. AU - Hankinson, O. PY - 1995 DA - 1995// TI - Identification of functional domains of the aryl hydrocarbon receptor JO - J Biol Chem VL - 270 ID - Fukunaga1995 ER - TY - JOUR AU - Jain, S. AU - Dolwick, K. M. AU - Schmidt, J. V. AU - Bradfield, C. A. PY - 1994 DA - 1994// TI - Potent transactivation domains of the Ah receptor and Ah receptor nuclear translocator map to their carboxyl termini JO - J Biol Chem VL - 269 ID - Jain1994 ER - TY - JOUR AU - Rowlands, J. C. AU - McEwan, I. J. AU - Gustafsson, J. A. PY - 1996 DA - 1996// TI - Trans-activation by the human aryl hydrocarbon receptor and aryl hydrocarbon receptor nuclear translocator proteins: direct interactions with basal transcription factors JO - Mol Pharmacol VL - 50 ID - Rowlands1996 ER - TY - JOUR AU - Adams, S. M. AU - Lindmeier, J. B. AU - Duvernell, D. D. PY - 2006 DA - 2006// TI - Microsatellite analysis of the phylogeography, Pleistocene history and secondary contact hypotheses for the killifish, Fundulus heteroclitus JO - Mol Ecol VL - 15 ID - Adams2006 ER - TY - JOUR AU - Nielsen, R. PY - 2001 DA - 2001// TI - Statistical tests of selective neutrality in the age of genomics JO - Heredity VL - 86 ID - Nielsen2001 ER - TY - JOUR AU - Anisimova, M. AU - Nielsen, R. AU - Yang, Z. PY - 2003 DA - 2003// TI - Effect of recombination on the accuracy of the likelihood method for detecting positive selection at amino acid sites JO - Genetics VL - 164 ID - Anisimova2003 ER - TY - JOUR AU - Delport, W. AU - Poon, A. F. Y. AU - Frost, S. D. W. AU - Kosakovsky Pond, S. L. PY - 2010 DA - 2010// TI - Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology JO - Bioinformatics VL - 26 ID - Delport2010 ER - TY - JOUR AU - Bustamante, C. D. AU - Wakeley, J. AU - Sawyer, S. A. AU - Hartl, D. L. PY - 2001 DA - 2001// TI - Directional selection and the site-frequency spectrum JO - Genetics VL - 159 ID - Bustamante2001 ER - TY - JOUR AU - Mulvey, M. AU - Newman, M. C. AU - Vogelbein, W. K. AU - Unger, M. A. AU - Ownby, D. R. PY - 2003 DA - 2003// TI - Genetic structure and mtDNA diversity of Fundulus heteroclitus populations from polycyclic aromatic hydrocarbon-contaminated sites JO - Environ Toxicol Chem VL - 22 ID - Mulvey2003 ER - TY - JOUR AU - Williams, L. M. AU - Oleksiak, M. F. PY - 2011 DA - 2011// TI - Evolutionary and functional analyses of cytochrome P4501A promoter polymorphisms in natural populations JO - Mol Ecol VL - 20 ID - Williams2011 ER - TY - JOUR AU - Cohen, C. S. AU - Tirindelli, J. AU - Gomez-Chiarri, M. AU - Nacci, D. PY - 2006 DA - 2006// TI - Functional implications of Major Histocompatibility (MH) variation using estuarine fish populations JO - Integr Comp Biol VL - 46 ID - Cohen2006 ER - TY - JOUR AU - Whitehead, A. AU - Crawford, D. L. PY - 2006 DA - 2006// TI - Neutral and adaptive variation in gene expression JO - Proc Natl Acad Sci USA VL - 103 ID - Whitehead2006 ER - TY - JOUR AU - Pritchard, J. K. AU - Di Rienzo, A. PY - 2010 DA - 2010// TI - Adaptation - not by sweeps alone JO - Nat Rev Genet VL - 11 ID - Pritchard2010 ER - TY - JOUR AU - Hermisson, J. AU - Pennings, P. S. PY - 2005 DA - 2005// TI - Soft sweeps: molecular population genetics of adaptation from standing genetic variation JO - Genetics VL - 169 ID - Hermisson2005 ER - TY - JOUR AU - Barrett, R. D. AU - Schluter, D. PY - 2008 DA - 2008// TI - Adaptation from standing genetic variation JO - Trends Ecol Evol VL - 23 ID - Barrett2008 ER - TY - JOUR AU - Pritchard, J. K. AU - Pickrell, J. K. AU - Coop, G. PY - 2010 DA - 2010// TI - The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation JO - Cur Biol: CB VL - 20 ID - Pritchard2010 ER - TY - JOUR AU - Hahn, M. E. AU - Karchner, S. I. AU - Evans, B. R. AU - Franks, D. G. AU - Merson, R. R. AU - Lapseritis, J. M. PY - 2006 DA - 2006// TI - Unexpected diversity of aryl hydrocarbon receptors in non-mammalian vertebrates: Insights from comparative genomics JO - J Exper Zool A: Comp Exp Biol VL - 305A ID - Hahn2006 ER - TY - JOUR AU - Billiard, S. M. AU - Timme-Laragy, A. R. AU - Wassenberg, D. M. AU - Cockman, C. AU - Di Giulio, R. T. PY - 2006 DA - 2006// TI - The role of the aryl hydrocarbon receptor pathway in mediating synergistic developmental toxicity of polycyclic aromatic hydrocarbons to zebrafish JO - Toxicol Sci VL - 92 ID - Billiard2006 ER - TY - JOUR AU - Waits, E. R. AU - Nebert, D. W. PY - 2011 DA - 2011// TI - Genetic architecture of susceptibility to PCB126-induced developmental cardiotoxicity in zebrafish JO - Toxicol Sci VL - 122 ID - Waits2011 ER - TY - JOUR AU - Clark, B. W. AU - Matson, C. W. AU - Jung, D. AU - Di Giulio, R. T. PY - 2010 DA - 2010// TI - AHR2 mediates cardiac teratogenesis of polycyclic aromatic hydrocarbons and PCB-126 in Atlantic killifish (Fundulus heteroclitus) JO - Aquat Toxicol VL - 99 ID - Clark2010 ER - TY - JOUR AU - Gerstein, A. C. AU - Lo, D. S. AU - Otto, S. P. PY - 2012 DA - 2012// TI - Parallel genetic changes and nonparallel gene-environment interactions characterize the evolution of drug resistance in yeast JO - Genetics VL - 192 ID - Gerstein2012 ER - TY - JOUR AU - Gompel, N. AU - Prud’homme, B. PY - 2009 DA - 2009// TI - The causes of repeated genetic evolution JO - Dev Biol VL - 332 ID - Gompel2009 ER - TY - JOUR AU - Karchner, S. I. AU - Franks, D. G. AU - Hahn, M. E. PY - 2005 DA - 2005// TI - AHR1B, a new functional aryl hydrocarbon receptor in zebrafish: tandem arrangement of ahr1b and ahr2 genes JO - Biochem J VL - 392 ID - Karchner2005 ER - TY - JOUR AU - Schmalz, W. F. AU - Hernandez, A. D. AU - Weis, P. PY - 2002 DA - 2002// TI - Hepatic histopathology in two populations of the mummichog, Fundulus heteroclitus JO - Mar Environ Res VL - 54 ID - Schmalz2002 ER - TY - JOUR AU - Zhou, T. AU - John-Alder, H. B. AU - Weis, P. AU - Weis, J. S. PY - 1999 DA - 1999// TI - Thyroidal status of mummichogs (Fundulus heteroclitus) from a polluted versus a reference habitat JO - Environ Toxicol Chem VL - 18 ID - Zhou1999 ER - TY - JOUR AU - Hoekstra, H. E. AU - Hirschmann, R. J. AU - Bundey, R. A. AU - Insel, P. A. AU - Crossland, J. P. PY - 2006 DA - 2006// TI - A single amino acid mutation contributes to adaptive beach mouse color pattern JO - Science VL - 313 ID - Hoekstra2006 ER - TY - JOUR AU - Pelz, H. J. AU - Rost, S. AU - Hunerberg, M. AU - Fregin, A. AU - Heiberg, A. C. AU - Baert, K. AU - MacNicoll, A. D. AU - Prescott, C. V. AU - Walker, A. S. AU - Oldenburg, J. PY - 2005 DA - 2005// TI - The genetic basis of resistance to anticoagulants in rodents JO - Genetics VL - 170 ID - Pelz2005 ER - TY - JOUR AU - Stephens, M. AU - Donnelly, P. PY - 2003 DA - 2003// TI - A comparison of bayesian methods for haplotype reconstruction from population genotype data JO - Amer J Hum Genet VL - 73 ID - Stephens2003 ER - TY - JOUR AU - Stephens, M. AU - Smith, N. J. AU - Donnelly, P. PY - 2001 DA - 2001// TI - A new statistical method for haplotype reconstruction from population data JO - Amer J Hum Genet VL - 68 ID - Stephens2001 ER - TY - JOUR AU - Niu, T. AU - Qin, Z. S. AU - Xu, X. AU - Liu, J. S. PY - 2002 DA - 2002// TI - Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms JO - Amer J Hum Genet VL - 70 ID - Niu2002 ER - TY - JOUR AU - Clement, M. AU - Posada, D. AU - Crandall, K. A. PY - 2000 DA - 2000// TI - TCS: a computer program to estimate gene genealogies JO - Mol Ecol VL - 9 ID - Clement2000 ER - TY - JOUR AU - Templeton, A. R. AU - Crandall, K. A. AU - Sing, C. F. PY - 1992 DA - 1992// TI - A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data: III: Cladogram estimation JO - Genetics VL - 132 ID - Templeton1992 ER - TY - JOUR AU - Librado, P. AU - Rozas, J. PY - 2009 DA - 2009// TI - DnaSP v5: A software for comprehensive analysis of DNA polymorphism data JO - Bioinformatics VL - 25 ID - Librado2009 ER - TY - JOUR AU - Excoffier, L. AU - Laval, G. AU - Schneider, S. PY - 2005 DA - 2005// TI - Arlequin ver. 3.0: An integrated software package for population genetics data analysis JO - Evol Bioinform Online VL - 1 ID - Excoffier2005 ER - TY - JOUR AU - Guinand, B. AU - Lemaire, C. AU - Bonhomme, F. PY - 2004 DA - 2004// TI - How to detect polymorphisms undergoing selection in marine fishes? A review of methods and case studies, including flatfishes JO - J Sea Res VL - 51 ID - Guinand2004 ER - TY - JOUR AU - Yang, Z. PY - 2007 DA - 2007// TI - PAML 4: a program package for phylogenetic analysis by maximum likelihood JO - Mol Biol Evol VL - 24 ID - Yang2007 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models JO - Bioinformatics VL - 22 ID - Stamatakis2006 ER - TY - JOUR AU - Posada, D. PY - 2008 DA - 2008// TI - jModelTest: phylogenetic model averaging JO - Mol Biol Evol VL - 25 ID - Posada2008 ER - TY - JOUR AU - Yang, Z. AU - Wong, W. S. AU - Nielsen, R. PY - 2005 DA - 2005// TI - Bayes empirical bayes inference of amino acid sites under positive selection JO - Mol Biol Evol VL - 22 ID - Yang2005 ER - TY - JOUR AU - Crooks, G. E. AU - Hon, G. AU - Chandonia, J. -. M. AU - Brenner, S. E. PY - 2004 DA - 2004// TI - WebLogo: a sequence logo generator JO - Genome Res VL - 14 ID - Crooks2004 ER - TY - JOUR AU - Jensen, J. AU - Bohonak, A. AU - Kelley, S. PY - 2005 DA - 2005// TI - Isolation by distance, web service JO - BMC Genet VL - 6 ID - Jensen2005 ER -