Locus | Fluorescence label | Motif | Primer sequence | Size range (bp) | Tm(°C) | GenBank accession no. |
---|---|---|---|---|---|---|
Rops08 | HEX | (CA)8TA(CA)3 | TTCTGAGGAAGGGTTCCGTGG | 192–212 | 63 to 52 | AB075033 |
GTTAAAGCAACAGGCACATGG | ||||||
Rp206 | HEX | (GT)9 | GCCAAATCCCATTAGATCACAGTTGA | 200–232 | 65 to 58 | AB353932 |
AGAAGTTAGACTTACGTGCTGC | ||||||
Rops05 | FAM | (AC)2GC(AC)7 | TGGTGATTAAGTCGCAAG | 114–148 | 56 | AB075031 |
GTGGTTGTGACTTGTACGTAAGTC | ||||||
Rops06 | FAM | (GT)3ACA(GT)11 | CTAAGGAGGTGCTGACCCTC | 114–146 | 65 to 58 | AB075032 |
TTAATCTGTGATGGGACACTG | ||||||
Rp109 | TAMRA | (AG)17 | GAGGAATCACAAAACCGTTTGG | 119–151 | 65 to 63 | AB353930 |
TGGGATTTGAGAGAGTGGTGGTG | ||||||
Rp200 | TAMRA | (AG)23 | GGTTTCTTTGTTCACCTGCTCTGG | 160–185 | 65 to 60 | AB353933 |
ACCTACGTGTCCACGGCTCT |