Table 1 Distribution of GlnRS, GluRS and gatCAB in bacteria whole genomes
From: Evolutionary insights about bacterial GlxRS from whole genome analyses: is GluRS2 a chimera?
Bacterial phyla | GluRS copy | 1 | 2 | 2 | 1 | 1 | |
|---|---|---|---|---|---|---|---|
GlnRS | × | × | √ | √ | √ | ||
gatCAB | √ | √ | √ | √ | × | ||
abbr | Total | Occurrences | |||||
Acidobacteria | ad | 6 | 3 | 2 | -- | 1 | -- |
Green non-sulfur | ns | 7 | 6 | -- | -- | 1 | -- |
Green sulfur | gs | 6 | 5 | -- | -- | 1 | -- |
Deinococcus-Thermus | dt | 6 | -- | -- | -- | 6 | -- |
Hyperthermophilic | ht | 18 | 12 | 5 | -- | 1 | -- |
Cyanobacteria | cy | 7 | 7 | -- | -- | -- | -- |
Planctomycetes | pl | 5 | 2 | -- | -- | 3 | -- |
Verrucomicrobia | ve | 4 | -- | -- | -- | 4 | -- |
Fusobacteria | fu | 5 | 5 | -- | -- | -- | -- |
Bacteroidetes | ba | 14 | 1 | -- | -- | 1 | 12 |
Spirochaetes | sp | 5 | 4 | -- | -- | 1 | -- |
Chlamydiae | ch | 6 | 6 | -- | -- | -- | -- |
Actinobacteria | ac | 17 | 16 | -- | -- | 1 | -- |
Tenericutes | te | 6 | 3 | -- | -- | -- | 3 |
Firmicutes | fi | 28 | 18 | -- | -- | 8 | 2 |
Alpha-proteobacteria | α | 69 | 18 | 45 | 2 | 4 | -- |
Epsilon-proteobacteria | ϵ | 10 | -- | 4 | 6 | -- | -- |
Delta-proteobacteria | δ | 24 | 1 | -- | -- | 23 | -- |
Gamma-proteobacteria | γ | 80 | -- | 7 | -- | 28 | 45 |
Beta-proteobacteria | β | 43 | -- | -- | -- | 43 | -- |