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Table 3 Estimates of polymorphism (nucleotide diversity (π) and Tajima's D) within each subspecies and genetic differentiation (F ST ) between pairs of subspecies for each nuclear region

From: Differential introgression among loci across a hybrid zone of the intermediate horseshoe bat (Rhinolophus affinis)

  N π Tajima's D FST
Locus him mac hai him mac hai him mac hai him-mac hai-mac him-hai
Cx22 28 13 12 0.017 0 0 -1.156 0 0 0.95 0 0.95
Usp9x 42 12 9 0 0.079 0.116 0 1.381 0.196 0.94 -0.06 0.94
Pola1 20 11 8 0.287 1.187 0.404 -0.509 0.823 1.293 0.67 0.34 0.81
Chd1 42 15 17 0.067 0.036 0.089 -1.726* -1.503 0.103 0.91 0.61 0.86
H2a 25 15 10 1.019 0.289 0.097 1.064 -0.931 0.426 0.54 0.09 0.54
Sws1 48 12 7 0.353 0.267 0.416 0.944 -1.288 -1.576* 0.54 0.62 0.77
Thy 17 11 17 0.759 0.041 0.073 0.658 -1.129 0.292 0.47 0.08 0.53
Tg 20 10 10 0.213 0.895 0.802 -1.156 0.170 -0.108 0.56 0.14 0.50
Prestin-4 23 12 9 0.518 0.579 0.284 -0.133 -1.062 -1.446 0.62 0.64 0.73
Prestin-8 14 9 8 0.193 0.544 0.547 -1.246 1.179 0.637 0.59 0.23 0.71
Prestin-17 14 9 10 0.646 0.439 0.567 0.136 0.087 1.876 0.36 0.26 0.38
Prestin-18 13 11 9 0.784 0.435 0.330 1.103 0.185 1.456 0.43 0.06 0.46
FoxP2 23 12 9 0.315 0.204 0.054 0.486 0.327 -1.385 0.65 0.17 0.73
Kcnq4 16 11 8 0.164 0.081 0.064 1.999 -0.532 -1.401 0.31 0.06 0.28
  1. N is the number of individuals analyzed for each nuclear region within each subspecies. him represents himalayanus; mac represents macrurus; hai represents hainanus. *P < 0.05.