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Table 1 Genetic statistics of Colias PEPCK

From: A genetic polymorphism evolving in parallel in two cell compartments and in two clades

Taxon and form

n

subset

bp

S

#var

Ï€

k

θ

min recs

C. eurytheme

Common exons 2-13

36

Σ

1863

220

255

0.0269

50.06

0.028

60

nss

1424

27

28

0.0027

3.80

  

ss

439

193

227

0.1054

46.25

  

cyto 5′ exon 1

36

Σ

66

3

3

0.0143

0.94

0.011

 

nss

54

1

1

0.0010

0.06

  

ss

12

2

2

0.0739

0.89

  

mito 5′ exon 1

36

Σ

33

1

1

0.0154

0.58

0.015

 

nss

26

1

1

0.0197

0.51

  

ss

7

0

0

0.0000

0.00

  

C. meadii

Common exons 2-13

36

Σ

1863

158

173

0.0209

38.89

0.020

41

nss

1424

21

21

0.0020

2.89

  

ss

439

137

152

0.0821

36.02

  

cyto 5′ exon 1

36

Σ

66

1

1

0.0037

0.25

0.004

 

nss

54

0

0

0.0000

0.00

  

ss

12

1

1

0.0021

0.25

  

mito 5′ exon 1

36

Σ

33

0

0

    

nss

26

0

0

    
  

ss

7

0

0

    
  1. Tabulations done with DnaSP 5.1. Abbreviations: n, total number of alleles sequenced; subset, classes of sites within cDNA; bp, base pairs (per subset); Σ, all substitution sites; ss, synonymous sites; nss, nonsynonymous sites; S, number of segregating sites; #var, number of variants; π, nucleotide diversity per bp; k, average difference of nucleotides, pairwise among sequences (per whole gene); θ, 4N e μ, estimated from S, where Ne is effective population size and μ is mutation rate; min recs, minimum recombinations among sequences, estimated by the four-gamete test [25]; cyto, cytosol; mito, mitochondrial. Mean numbers of pairwise nucleotide differences between species for whole mito form: all sites 52.50, ss sites 47.49, nss sites 5.02. No sites are fixed for different substitutions between the two species.