Skip to main content

Table 1 Significant recombination events detected among NAT genes using six different methods

From: Rapid birth-and-death evolution of the xenobiotic metabolizing NAT gene family in vertebrates with evidence of adaptive selection

Species

Genes

5' breakpointa

3' breakpointa

Length (bp)a

P-value rangeb

Methodsb

Rattus norvegicus

NAT1 : NAT2

382/385/401

609/611

209/225/230

9.06 E-3–1.00 E-6

GeneConv, RDP, MaxChi, Chimaera, Bootscan, SiScan

Oryzias latipes

NAT1 : NAT2

1

260/262

260/262

8.87 E-3–6.39 E-6

Geneconv, RDP, MaxChi, Chimaera, Bootscan

Echinops telfairi

NAT1 : NAT2

43

642

600

1.00 E-4

Geneconv

Myotis lucifugus

NAT1 : NAT2

600/615

742/749

128/150

6.06 E-4–1.39 E-4

MaxChi, Chimaera,

Mus musculus

NAT1 : NAT2

382

518

137

2.00 E-4

Geneconv

Mesocricetus auratus

NAT1 : NAT2

1

155/163/167

155/163/167

9.32 E-3–2.93 E-4

RDP, Chimaera, Bootscan, SiScan

Myotis lucifugus

NAT1 : NAT2

1

204

204

3.00 E-4

Geneconv

Danio rerio

NAT2 : NAT3

88

507

420

7.90 E-3

Geneconv

  1. a Breakpoint positions refer to the nt positions in the full alignment of the vertebrate NAT sequences. They may slightly vary depending on the method used to detect recombinant sequences, leading to different gene conversion tract lengths.
  2. b In cases where multiple methods detected the same or a similar conversion event, we reported the P-value range, i.e. the worst and the best P-value; the method yielding the best P-value is shown in bold. Otherwise, only the P-value of the single algorithm detecting a conversion event is presented.