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Table 3 Species list

From: Cnidarian phylogenetic relationships as revealed by mitogenomics

Phylum Subphylum Class Subclass Order Species Accession number Reference
Cnidaria Anthozoa Hexacorallia   Actiniaria Metridium senile [GenBank:NC_000933] [68]
      Nematostella sp [GenBank:NC_008164] [22]
     Antipatharia Chrysopathes formosa [GenBank:NC_008411] [39]
      Cirripathes lutkeni [GenBank:NC_018377] this study
      Leiopathes glaberrima [GenBank:FJ597643] & [GenBank:FJ597644] [69]
     Corallimorpharia Discosoma sp [GenBank:NC_008071] [22]
      Rhodactis sp [GenBank:NC_008158] [22]
      Ricordea florida [GenBank:NC_008159] [22]
     Scleractinia Acropora tenuis [GenBank:NC_003522] [70]
      Agaricia humilis [GenBank:NC_008160] [22]
      Anacropora matthai [GenBank:NC_006898] Unpublished
      Astrangia sp [GenBank:NC_008161] [22]
      Colpophyllia natans [GenBank:NC_008162] [22]
      Lophelia pertusa [GenBank:NC_015143] [71]
      Madracis mirabilis [GenBank:NC_011160] [72]
      Montastraea annularis [GenBank:NC_007224] [73]
      Montastraea faveolata [GenBank:NC_007226] [73]
      Montastraea franksi [GenBank:NC_007225] [73]
      Montipora cactus [GenBank:NC_006902] Unpublished
      Mussa angulosa [GenBank:NC_008163] [22]
      Pavona clavus [GenBank:NC_008165] [22]
      Pocillopora damicornis [GenBank:NC_009797] [74]
      Pocillopora eydouxi [GenBank:NC_009798] [74]
      Porites porites [GenBank:NC_008166] [22]
      Seriatopora caliendrum [GenBank:NC_010245] [72]
      Seriatopora hystrix [GenBank:NC_010244] [72]
      Siderastrea radians [GenBank:NC_008167] [22]
      Stylophora pistillata [GenBank:NC_011162] [72]
     Zoantharia Palythoa sp [GenBank: DQ640650] [22]
      Savalia savaglia [GenBank:NC_008827] [75]
     Ceriantharia Ceriantheopsis americanus [GenBank:JX023261-JX023265] this study
   Octocorallia   Alcyonacea Acanella eburnea [GenBank:NC_011016] [76]
      Briareum asbestinum [GenBank:NC_008073] [22]
      Corallium konojoi [GenBank:NC_015406] [77]
      Dendronephthya castanea [GenBank: GU047877] [10]
      Dendronephthya gigantean [GenBank:NC_013573] Unpublished
      Dendronephthya mollis [GenBank: HQ694725] [10]
      Dendronephthya putteri [GenBank: HQ694726] [10]
      Dendronephthya suensoni [GenBank: GU047878] [10]
      Echinogorgia complexa [GenBank: HQ694727] [10]
      Euplexaura crassa [GenBank: HQ694728] [10]
      Keratoisidinae sp [GenBank:NC_010764] [78]
      Paracorallium japonicum [GenBank:NC_015405] [77]
      Pseudopterogorgia bipinnata [GenBank:NC_008157] [22]
      Sarcophyton glaucum [GenBank: AF064823] & [GenBank: AF063191] [79, 80]
      Scleronephthya gracillimum [GenBank: GU047879] [10]
      Sinularia peculiaris [GenBank:NC_018379] this study
     Helioporacea Heliopora coerulea [GenBank:JX023267-JX023272] this study
     Pennatulacea Renilla mulleri [GenBank:NC_018378] this study
      Stylatula elongata [GenBank:NC_018380] this study
  Medusozoa Cubozoa   Carybdeida Alatina moseri [GenBank:JN700951-JN700958] [27]
      Carukia barnesi [GenBank:JN700959-JN700962] [27]
      Carybdea xaymacana [GenBank:JN700977-JN700983] [27]
     Chirodropida Chironex fleckeri [GenBank:JN700963-JN700968] [27]
      Chiropsalmus quadrumanus [GenBank:JN700969-JN700974] [27]
   Hydrozoa Trachylina Limnomedusae Cubaia Aphrodite [GenBank:JN700942] [27]
    Hydroidolina Aplanulata Ectopleura larynx [GenBank:JN700938] [27]
      Hydra magnipapillata [GenBank:NC_011220] & [GenBank:NC_01122] [81]
      Hydra oligactis [GenBank:NC_010214] [8]
      Hydra vulgaris [GenBank:BN001179] & [GenBank:BN001180] [81]
     Capitata Millepora platyphylla [GenBank:JN700943] [27]
      Pennaria tiarella [GenBank:JN700950] [27]
     Filifera III Clava multicornis [GenBank:JN700935] [27]
     Filifera IV Nemopsis bachei [GenBank:JN700947] [27]
     Leptothecata Laomedea flexuosa [GenBank:JN700945] [27]
   Scyphozoa   Coronatae Linuche unguiculata [GenBank:JN700939] [27]
    Discomedusae Rhizostomeae Cassiopea Andromeda [GenBank:JN700934] [27]
      Cassiopea frondosa [GenBank:JN700936] [27]
      Catostylus mosaicus [GenBank:JN700940] [27]
      Rhizostoma pulmo [GenBank:JN700987] & [GenBank:JN700988] [27]
     Semaeostomeae Aurelia aurita A [GenBank:NC_008446] [11]
      Aurelia aurita B [GenBank: HQ694729] [10]
      Chrysaora quinquecirrha [GenBank: HQ694730] [10]
      Chrysaora sp [GenBank:JN700941] [27]
      Cyanea capillata [GenBank:JN700937] [27]
      Pelagia noctiluca [GenBank:JN700949] [27]
   Staurozoa   Stauromedusae Craterolophus convolvulus [GenBank:JN700975] & [GenBank:JN700976] [27]
      Haliclystus sanjuanensis [GenBank:JN700944] [27]
      Lucernaria janetae [GenBank:JN700946] [27]
Placozoa      BZ10101 [GenBank:NC_008832] [82]
      BZ243 [GenBank:NC_008834] [82]
      BZ49 [GenBank:NC_008833] [82]
      Trichoplax adhaerens [GenBank:NC_008151] [83]
Porifera   Homoscleromorpha    Corticium candelabrum [GenBank:NC_014872] [38]
      Oscarella carmela [GenBank:NC_009090] [84]
      Plakina monolopha [GenBank:NC_014884] [38]
      Plakinastrella cf. onkodes [GenBank:NC_010217] [84]
   Demospongiae G1 = Keratosa   Igernella notabilis [GenBank:NC_010216] [84]
      Ircinia strobilina [GenBank:NC_013662] [85]
    G2 = Myxospongiae   Aplysina fulva [GenBank:NC_010203] [84]
      Chondrilla aff. nucula [GenBank:NC_010208] [84]
      Halisarca dujardini [GenBank:NC_010212] [84]
    G3 = marine Haplosclerida   Amphimedon compressa [GenBank:NC_010201] [84]
      Callyspongia plicifera [GenBank:NC_010206] [84]
      Xestospongia muta [GenBank:NC_010211] [84]
    G4 = Democlavia   Agelas schmidti [GenBank:NC_010213] [84]
      Axinella corrugata [GenBank:NC_006894] [84]
      Cinachyrella kuekanthali [GenBank:NC_010198] [84]
      Ephydatia muelleri [GenBank:NC_010202] [84]
      Geodia neptuni [GenBank:NC_006990] [37]
      Lubomirskia baicalensis [GenBank:NC_013760] [86]
      Suberites domuncula [GenBank:NC_010496] [87]
      Tethya actinia [GenBank:NC_006991] [37]
      Topsentia ophiraphidites [GenBank:NC_010204] [84]
  1. List of species, with their accession number and reference, used for this studies. Bold species are from this study. Underline species are those included into the codon alignments.