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Table 3 Genetic diversity of COI haplogroups and EF1a haplotypes of Pyura chilensis

From: Isolation with differentiation followed by expansion with admixture in the tunicate Pyura chilensis

Hg

Site

n

H

S

h

π

ALL COI

PA

30

29

38

0.998

0.0069

CP

31

27

52

0.989

0.0122

PC

33

26

58

0.983

0.0117

LH

37

33

60

0.992

0.0163

PV

32

27

53

0.986

0.0130

TL

27

16

37

0.920

0.0152

LM

38

32

78

0.986

0.0401

AC

40

18

58

0.850

0.0178

Total value

268

171

150

0.981

0.0214

COI HG1

PA

30

29

38

0.998

0.0069

CP

27

24

39

0.989

0.0072

PC

29

22

43

0.978

0.0070

LH

27

24

44

0.989

0.0082

PV

27

24

40

0.989

0.0075

TL

18

10

18

0.843

0.0039

LM

11

8

19

0.927

0.0067

AC

24

8

9

0.612

0.0025

Total value

193

120

111

0.974

0.0066

COI HG2

CP

4

3

6

0.833

0.0049

PC

4

4

7

1.000

0.0062

LH

10

9

14

0.978

0.0051

PV

5

3

5

0.700

0.0033

TL

9

6

10

0.889

0.0054

LM

8

5

5

0.786

0.0026

AC

15

9

12

0.905

0.0050

Total value

55

31

32

0.874

0.0046

COI HG3

LM

19

19

32

1.000

0.0092

AC

1

-

-

-

-

Total value

20

20

32

1.000

0.0093

ALL EF1a

PA

19

12

8

0.885

0.0073

CP

18

14

10

0.895

0.0080

PC

16

12

11

0.893

0.0087

LH

26

15

10

0.905

0.0070

PV

21

13

10

0.852

0.0073

TL

15

15

11

0.940

0.0094

LM

25

17

12

0.844

0.0081

AC

22

17

12

0.908

0.0081

Total value

162

32

18

0.907

0.0084

  1. Number of analyzed sequences (n); number of haplotypes (H); number of segregating sites (S); haplotype diversity (h); nucleotide diversity (π).