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Table 1 Branch and site tests of selection in Mus

From: Positive selection in the adhesion domain of Mus sperm Adam genes through gene duplications and function-driven gene complex formations

Gene l n 2Δℓ M0N0 ω Branch 2Δℓ p 1 ; ω (M8) Site
(ω vs ω = 1.0) Selection (M8-M8a) Selection
Adam1a 321 5 9.78 0.16 Purifying 0   Purifying
Adam1b 321 5 0.03 0.91 Relaxed 3.89 0.07; 9.10 Positive
Adam1 321 10 63.11 0.21 Purifying 1.94   Purifying
Adam2 333 5 0.2 0.78 Relaxed 9.77 0.11; 12.87 Positive
Adam3 339 5 0.04 0.89 Relaxed 4.08 0.13; 8.92 Positive
Adam4a 327 5 6.18 0.22 Purifying 0   Purifying
Adam4b 327 5 3.25 4.69 Purifying 15.36 0.04; 38.74 Positive
Adam4 327 10 0.8 1.39 Relaxed 49.84 0.07; 23.54 Positive
Adam5 273 5 4.36 3.78 Positive 24.38 0.20; 30.03 Positive
Adam6a 327 5 9.75 0.21 Purifying 2.02   Purifying
Adam6b 327 5 9.74 0.17 Purifying 0.65   Purifying
Adam6 327 10 11.67 0.32 Purifying 8.15 0.08; 5.69 Positive
Adam7 267 5 11.03 0.15 Purifying 0   Purifying
Adam18 339 5 1.96 0.46 Relaxed 2.21   Purifying
Adam24 330 5 0.06 1.15 Relaxed 7.64 0.06; 19.11 Positive
Adam26a 327 4 0.07 0.87 Relaxed 1.53   Purifying
Adam26b 327 4 1.35 0.5 Relaxed 0.11   Purifying
Adam26 327 7 0.24 0.78 Relaxed 4.03 0.29; 3.63 Positive
Adam30 327 5 7.95 0.14 Purifying 0   Purifying
Adam32 285 5 1.91 0.46 Relaxed 0.01   Purifying
  1. n = number of species included; l = length of adhesion domain analyzed (bp); 2Δℓ = the difference in likelihood estimates from different models of selection; ω= dN/dS per codon for sites under positive selection; p1 = proportion of codon sites under positive selection. Test statistics (2Δℓ) are bolded (FDR corrected P < 0.05) or underlined (FDR corrected P < 0.10) to denote statistical significance.