A hybrid zone between Bathymodiolusmussel lineages from eastern Pacific hydrothermal vents

Johnson, Shannon B; Won, Yong-Jin; Harvey, Julio BJ; Vrijenhoek, Robert C

doi:10.1186/1471-2148-13-21

BMC Ecology and Evolution

Table 5 Genic diversity in eastern Pacific Bathymodiolus mussels

From: A hybrid zone between Bathymodiolusmussel lineages from eastern Pacific hydrothermal vents

Parameter¹	N13	N11	N9	GAR	S7	S11	S14²	S17	S18²	S21²	S23	S31	S38	Total
COI (N)	22	21	62	48	45	21	14	135	47	34	21	41	27	538
k	10	12	20	21	16	8	6	37	14	20	11	17	8	121
H	13	17	23	28	19	11	6	34	15	20	11	23	14	96
h	0.810	0.871	0.753	0.856	0.839	0.776	0.769	0.841	0.710	0.934	0.819	0.870	0.658	0.890
SD	0.062	0.060	0.052	0.044	0.033	0.075	0.090	0.024	0.064	0.026	0.082	0.039	0.087	0.008
π x100	0.674	0.710	0.741	0.761	0.597	0.618	0.247	0.485	0.242	0.600	1.394	0.673	0.523	1.637
SD x100	0.393	0.412	0.420	0.425	0.353	0.366	0.186	0.292	0.174	0.357	0.754	0.383	0.314	0.094
Fu’s Fs	−0.625	−3.360	−6.277	−7.654	−5.578	−0.221	−2.300	−26.905	−10.272	−13.659	0.109	−5.300	−0.176
Prob	0.369	0.044	0.023	0.003	0.012	0.500	0.021	0.000	0.000	0.000	0.554	0.031	0.508
SAHH (N)	32	30	26	28	22	20	n.d.	38	n.d.	n.d.	42	46	58	232
k	2	6	1	3	1	6		7			3	3	3	9
H	3	4	2	4	2	4		6			6	5	5	14
h	0.123	0.402	0.271	0.206	0.485	0.553		0.617			0.623	0.707	0.525	0.806
SD	0.078	0.104	0.099	0.101	0.064	0.111		0.056			0.044	0.036	0.071	0.013
π x100	0.079	0.516	0.170	0.176	0.305	0.649		0.568			0.784	0.676	0.436	1.476
SD x100	0.138	0.423	0.213	0.217	0.305	0.504		0.449			0.493	0.504	0.372	0.894
Fu’s Fs	−2.437	−0.073	0.511	−2.610	1.139	0.063		−1.656			−1.977	0.004	−0.776
Prob	0.003	0.464	0.379	0.007	0.686	0.492		0.127			0.103	0.528	0.278
ANT (N)	26	28	34	52	24	22	n.d.	38	n.d.	n.d	40	54	52	370
k	2	1	1	2	1	1		3			2	2	1	3
H	1	0	0	1	0	0		1			1	1	0	1
h	0.148	0	0	0.039	0	0		0.240			0.296	0.073	0	0.449
SD	0.088	0	0	0.036	0	0		0.086			−0.079	0.048	0	0.020
π x100	0.029	0	0	0.008	0	0		0.048			0.060	0.015	0	0.091
SD x100	0.049	0	0	0.002	0	0		0.063			0.071	0.033	0	0.004
Fu’s Fs	−0.317	0	0	−1.669	0	0		−1.172			0.838	−0.949	0
Prob	0.182	NA	NA	0.029	NA	NA		0.131			0.513	0.089	NA
Cat (N)	36	26	22	50	22	20	n.d.	42	n.d.	n.d	40	56	66	380
k	0	0	0	1	0	0		2			2	2	0	2
H	1	1	1	2	1	1		3			4	3	1	4
h	0	0	0	0.040	0	0		0.094			0.480	0.198	0	0.465
SD	0	0	0	0.380	0	0		0.061			0.069	0.068	0	0.017
π x100	0	0	0	0.105	0	0		0.370			2.267	0.948	0	2.380
SD x100	0	0	0	0.314	0	0		0.610			1.814	1.034	0	1.834
Fu’s Fs	0	0	0	−1.636	0	0		−2.089			0.294	−0.222	0
Prob	NA	NA	NA	0.040	NA	NA		0.016			0.555	0.338	NA
Col-1 (N)	32	28	24	24	20	22	n.d.	40	n.d.	n.d.	42	46	54	332
k	0	0	0	0	0	0		2			2	2	2	3
H	1	1	1	1	1	1		2			2	4	4	4
h	0	0	0	0	0	0		0.142			0.177	0.467	0.526	0.370
SD	0	0	0	0	0	0		0.071			0.074	0.070	0.071	0.034
π x100	0	0	0	0	0	0		0.274			0.340	0.777	0.715	0.652
SD x100	0	0	0	0	0	0		0.331			0.380	0.633	0.597	0.553
Fu’s Fs	0	0	0	0	0	0		0.773			1.159	0.252	0.167
Prob	NA	NA	NA	NA	NA	NA		0.495			0.590	0.537	0.526
EF1α (N)	32	28	22	22	18	22	n.d.	18	n.d.	n.d.	42	50	60	314
k	0	0	0	0	0	1		0			1	0	0	1
H	1	1	1	1	1	2		1			2	1	1	2
h	0	0	0	0	0	0.091		0			0.345	0	0	0.474
SD	0	0	0	0	0	0.081		0			0.073	0	0	0.013
π x100	0	0	0	0	0	0.505		0			1.916	0	0	2.632
SD x100	0	0	0	0	0	1.043		0			2.14	0	0	2.541
Fu’s Fs	0	0	0	0	0	−0.957		0			1.119	0	0
Prob	NA	NA	NA	NA	NA	0.07		NA			0.576	NA	NA

¹ Abbreviations: N = sample size per locus; H = number of haplotypes; k = number of polymorphic sites; h = haplotype diversity; π = nucleotide diversity; SD = one standard deviation. NA = no data. Bold values indicate significance.
² Data from Plouviez et al. 2010; n.d. indicates no data.

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