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Table 1 Allelic profiles of Wolbachia genes in the five w Pip groups

From: Population structure of Wolbachia and cytoplasmic introgression in a complex of mosquito species

wPip group wPip Haplotypes n wPip Haplotypes Population numbers
    ank2 pk1 GP15 MutL RepA  
wPip-I
  wPip-I known haplotypes 821 a a a a a,b 1-45 /57-63/ 66-71/ 74-75/ 77-78/ 105/ 108-114/ 119- 120/ 123-124/ 129/ 146/ 162-165/ 167-168/ 175-176
  #1 1 d a a a a 61
  #2 1 b a ND ND ND 167
wPip-II
  wPip-II known haplotypes 276 e c b,e,f b,c,d a 64/ 160-107/ 115-117/ 121-122/ 130-132/ 137-145/ 147/ 152-155/ 157/ 159-160/ 165-167/ 179-182
  #3 1 a c j* c b 167
  #4 1 a c f - a 152
  #5 2 a c b c a 140/156
  #6 3 a c b b a 142
  #7 3 b c c ND b 147/159
  #8 1 b c c e b 157
  #9 3 b c ND c b 182
  #10 9 b c ND ND b 178/179/180
  #11 4 b c h* c a 178
  #12 3 b c i* b b 167
  #13 1 b c k* c a 179
  #14 7 b c h* c ND 106/179
  #15 1 b c c - b 147
  #16 10 b c k c - 107
  #17 1 c c d - a 157
wPip-III
  wPip-III known haplotypes 401 b b c b,e b 18/ 72-76/ 78-89/ 92-94/ 96-99/ 131/ 134/ 136/ 140/ 144-145/ 148-152/ 154-156/ 158-161/ 165-167/ 179/ 182
  #18 1 a b - - - 81
  #19 1 c b - - b 85
  #20 6 d b c b b 73
  #21 1 e b c - b 129
  #22 1 e b l* ND a 156
  #23 1 e b ND ND ND 131
  #24 1 e b f c a 157
  #25 1 e b c e b 140
wPip-IV
  wPip-IV known haplotype 260 c d d c a 51/ 90/ 100-104/ 118/ 121/ 125-129/ 131/ 133/ 135/ 169-174
  #26 1 e d d - a 129
wPip-V
  wPip-V known haplotype 78 d e g f a 45-50/ 54/ 65/ 100/ 106
  #27 19 a e g c a 52/53
  #28 11 b e g a a 90
undetermined         
  #29 2 b a c c b 167
  1. New wPip haplotypes are identified by #number. Allelic profiles for GP15, MutL and RepA loci were determined for all new wPip haplotypes and for a subsample of specimens for the known wPip haplotypes. ND, allele not determined (DNA shortage); Dash, null allele (no PCR product); Asterisk, new allele.