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Table 1 Taxonomic distribution of RedCAP sequences in red algae with primary plastids and algae with secondary plastids of red algal origin

From: A novel type of light-harvesting antenna protein of red algal origin in algae with secondary plastids

Classification (class, species)

Database [references]

Gene model

Cryptophyceae

  

Guillardia theta

JGI [65, 66]

Guith1:186670

Coccolithophyceae

  

Emiliania huxleyi

JGI [68]

Emihu1:310333

Isochrysis galbana

GenBank EST [70]

gi106825476

Pavlovophyceae

  

Diacronema lutheri

GenBank EST [70]

gi106858477

Phaeophyceae

  

Ectocarpus siliculosus

GenBank EST [21, 70]

gi242173528

 

OrcAE [22, 23]

Esi0256_0036

Bacillariophyceae

  

Fragilariopsis cylindrus

JGI [68]

Fracy1:210193

Phaeodactylum tricornutum

JGI [61, 62]

Phatr2:17326

Coscinodiscophyceaes

  

Thalassiosira pseudonana

JGI [63, 64]

Thaps3:270215

Dictyochophyceae

  

Pseudochattonella farcimen

GenBank EST [24, 70]

gi319967268

Pelagophyceae

  

Aureococcus anophagefferens

JGI [25, 68]

Auran1:25646

Florideophyceae

  

Furcellaria lumbricalis

GenBank EST [26, 70]

gi294363890

Gracilaria changii

GenBank EST [70]

gi120457728

Gracilaria tenuistipitata

GenBank EST [70]

gi327362708

Griffithsia japonica

UniProt [75]

Q7XZ09

Griffithsia okiensis

GenBank EST [27, 70]

gi224829379

Cyanidiophyceae

  

Galdieria sulphuraria

Michigan State University

contig 9803

 

Galdieria database[7274]

 

Bangiophyceae

  

Pyropia yezoensis

GenBank EST [28, 70]

gi8590586

Porphyridiophyceae

  

Porphyridium purpureum

GenBank EST [29, 70]

gi317790494