| ACT | GPDH | β-TUB | ITS | ||||
---|---|---|---|---|---|---|---|---|
 | Trinidad | Mexico | Trinidad | Mexico | Trinidad | Mexico | Trinidad | Mexico |
(a) | ||||||||
# polymorphic sites, S | 54 | 42 | 35 | 94 | 5 | 38 | 58 | 25 |
Total # mutations, Eta | 60 | 44 | 38 | 12 | 5 | 40 | 58 | 26 |
Theta (per site), S | 0.109 | 0.085 | 0.062 | 0.288 | 0.004 | 0.039 | 0.033 | 0.015 |
Theta (per site), Eta | 0.109 | 0.085 | 0.063 | 0.278 | 0.004 | 0.040 | 0.032 | 0.016 |
Theta (per site), Pi | 0.044 | 0.079 | 0.036 | 0.206 | 0.009 | 0.039 | 0.012 | 0.015 |
Theta-W (per site) | 0.087 | 0.074 | 0.054 | 0.178 | 0.004 | 0.037 | 0.031 | 0.015 |
Theta-W (per sequence) | 13.631 | 11.839 | 8.912 | 26.496 | 1.273 | 10.711 | 14.769 | 7.047 |
Conservation threshold, CT | 0.52 | 0.580 | 0.45 | 0.38 | 0.99 | 0.91 | 0.92 | 0.92 |
Ave. # nucleotide differences, k | 6.49 | 11.168 | 4.778 | 24.111 | 2.557 | 10.063 | 5.414 | 7.132 |
Nucleotide diversity, Pi | 0.042 | 0.072 | 0.035 | 0.162 | 0.009 | 0.037 | 0.011 | 0.015 |
Nucleotide diversity, Pi(JC) | 0.045 | 0.081 | 0.036 | 0.221 | 0.009 | 0.039 | 0.012 | 0.016 |
Pairwise comparisons | Â | Â | Â | Â | Â | Â | Â | Â |
Ave # nucleotide differences, KT | 8.833 | 13.432 | 6.541 | 6.366 | ||||
Total nucleotide diversity, PiT | 0.057 | 0.091 | 0.023 | 0.013 | ||||
(b) | ||||||||
# polymorphic sites, S | 4 | 6 | 0 | 1 | 0 | 10 | 0 | 3 |
Total # mutations, Eta | 4 | 6 | 0 | 1 | 0 | 10 | 0 | 3 |
Theta (per site), S | 0.008 | 0.009 | 0.000 | 0.002 | 0.000 | 0.016 | 0.000 | 0.002 |
Theta (per site), Eta | 0.008 | 0.009 | 0.000 | 0.002 | 0.000 | 0.016 | 0.000 | 0.002 |
Theta (per site), Pi | 0.012 | 0.006 | 0.000 | 0.002 | 0.000 | 0.009 | 0.000 | 0.001 |
Theta-W (per site) | 0.008 | 0.009 | 0.000 | 0.002 | 0.000 | 0.016 | 0.000 | 0.002 |
Theta-W (per sequence) | 1.543 | 2.121 | 0.000 | 0.353 | 0.000 | 3.535 | 0.000 | 1.060 |
Conservation threshold, CT | 0.710 | 0.770 | 0.670 | 0.670 | 0.960 | 0.970 | 0.930 | 0.930 |
Ave. # nucleotide differences, k | 2.286 | 0.2 | 0.000 | 0.356 | 0.000 | 1.800 | 0.000 | 0.756 |
Nucleotide diversity, Pi | 0.012 | 0.001 | 0.000 | 0.002 | 0.000 | 0.013 | 0.000 | 0.002 |
Nucleotide diversity, Pi(JC) | 0.012 | 0.001 | 0.000 | 0.002 | 0.000 | 0.014 | 0.000 | 0.002 |
Pairwise comparisons | Â | Â | Â | Â | Â | Â | Â | Â |
Ave # nucleotide differences, KT | 5.758 | 0.209 | 36.765 | 1.268 | ||||
Total nucleotide diversity, PiT | 0.029 | 0.001 | 0.272 | 0.003 |