Genetic structure and demographic history of Colletotrichum gloeosporioides sensu lato and C. truncatum isolates from Trinidad and Mexico

Table 2 Summary of the number of isolates, length of gene fragment, haplotype number, haplotype diversity, and haplotype frequencies for Trinidad and Mexico populations of Colletotrichum gloeosporioides sensu lato and C. truncatum

	ACT		GPDH		B-TUB		ITS
	Trinidad	Mexico	Trinidad	Mexico	Trinidad	Mexico	Trinidad	Mexico
(a)
# isolates	30	17	30	17	30	17	30	17
Common sequence length, nt	174	174	221	221	301	301	496	496
No. of haplotypes, h	14	10	12	6	3	6	10	7
Haplotype diversity, Hd	0.922	0.863	0.852	0.800	0.576	0.768	0.786	0.811
Pairwise comparisons
Total # haplotypes, hT	23		16		9		14
Total haplotype diversity, HdT	0.945		0.849		0.816		0.822
(b)
# isolates	8	13	8	13	8	13	8	13
Common sequence length, nt	174	174	221	221	301	301	496	496
No. of haplotypes, h	2	2	1	3	1	4	1	4
Haplotype diversity, Hd	0.571	0.667	0	0.356	0	0.533	0	0.378
Pairwise comparisons
Total # haplotypes	4		2		5		4
Total haplotype diversity, Hdt	0.676		0.209		0.679		0.634

ISSN: 2730-7182