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Table 2 Summary of the number of isolates, length of gene fragment, haplotype number, haplotype diversity, and haplotype frequencies for Trinidad and Mexico populations of Colletotrichum gloeosporioides sensu lato and C. truncatum

From: Genetic structure and demographic history of Colletotrichum gloeosporioides sensu lato and C. truncatum isolates from Trinidad and Mexico

  ACT GPDH B-TUB ITS
  Trinidad Mexico Trinidad Mexico Trinidad Mexico Trinidad Mexico
(a)
# isolates 30 17 30 17 30 17 30 17
Common sequence length, nt 174 174 221 221 301 301 496 496
No. of haplotypes, h 14 10 12 6 3 6 10 7
Haplotype diversity, Hd 0.922 0.863 0.852 0.800 0.576 0.768 0.786 0.811
Pairwise comparisons         
Total # haplotypes, hT 23   16   9   14  
Total haplotype diversity, HdT 0.945   0.849   0.816   0.822  
(b)         
# isolates 8 13 8 13 8 13 8 13
Common sequence length, nt 174 174 221 221 301 301 496 496
No. of haplotypes, h 2 2 1 3 1 4 1 4
Haplotype diversity, Hd 0.571 0.667 0 0.356 0 0.533 0 0.378
Pairwise comparisons         
Total # haplotypes 4   2   5   4  
Total haplotype diversity, Hdt 0.676   0.209   0.679   0.634