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Table 1 Mammalian SAMD9 and SAMD9L genes accession numbers from species used in phylogenetic and selection analyses

From: Evolution and divergence of the mammalian SAMD9/SAMD9L gene family

SAMD9

    

Mammalian order

Common name

Species name

Database ID

Abbreviation

Artiodactyla

Cow

Bos taurus

Chromosome 4: 10,302,667-10,307,412a

SAMD9_Bota

 

Pig

Sus scrofa

Chromosome 9: 79,679,836-79,684,587a

SAMD9_Susc

Chiroptera

Little brown myotis

Myotis lucifugus

Scaffold AAPE02063303: 7,766-12,520a

SAMD9_Mylu

Lagomorpha

European rabbit

Oryctolagus cuniculus

Chromosome 10: 35,728,133-35,732,926a

SAMD9_Orcu

Perissodactyla

Horse

Equus caballus

Chromosome 4: 36,749,161-36,753,927 a

SAMD9_Eqca

Primates

Common chimpanzee

Pan troglodytes

Chromosome 7: 92,731,148-92,735,917 a

SAMD9_Patr

 

Human

Homo sapiens

Chromosome 7: 92,728,829-92,747,336 a

SAMD9_Hosa

 

Northern white-cheeked gibbon

Nomascus leucogenys

SuperContig GL397261.1: 24,263,901-24,268,665 a

SAMD9_Nole

 

Rhesus monkey

Macaca mulatta

Chromosome 3: 124,130,532-124,147,894 a

SAMD9_Mamu

 

Sumatran orangutan

Pongo abelii

Chromosome 7: 83,034,053-83,038,819 a

SAMD9_Poab

 

Western gorilla

Gorilla gorilla

Chromosome 7: 90,353,240-90,358,009 a

SAMD9_Gogo

Rodentia

Brown rat

Rattus norvegicus

XM_575365.2 b

SAMD9_Rano

 

Chinese hamster

Cricetulus griseus

AFTD01024384.1 b

SAMD9_Crgr

 

Domestic Guinea pig

Cavia porcellus

AAKN02016823.1 b

SAMD9_Capo

Soricomorpha

Common shrew

Sorex araneus

Scaffold_257382: 52,686-57,449 a

SAMD9_Soar

SAMD9L

    

Mammalian order

Common name

Species name

Database ID

Abbreviation

Carnivora

Domestic dog

Canis lupus familiaris

XM_539422.3b

SAMD9L_Calu

 

Giant panda

Ailuropoda melanoleuca

Scaffold GL192585.1: 1,477,672-1,482,429a

SAMD9L_Aime

Didelphimorphia(Marsupialia)

Grey short-tailed opossum

Monodelphis domestica

XM_001378475.1b

SAMD9L_Modo

Erinaceomorpha

West European hedgehog

Erinaceus europaeus

GeneScaffold_8766: 48,007-52,945 a

SAMD9L_Ereu

Lagomorpha

European rabbit

Oryctolagus cuniculus

Chromosome 10: 35,699,236-35,703,990 a

SAMD9L_Orcu

Perissodactyla

Horse

Equus caballus

Chromosome 4: 36,788,011-36,792,765 a

SAMD9L_Eqca

Primates

Common chimpanzee

Pan troglodytes

Chromosome 7: 92,759,911-92,778,202 a

SAMD9L_Patr

 

Common marmoset

Callithrix jacchus

Chromosome 8: 54,405,622-54,420,907 a

SAMD9L_Caja

 

Human

Homo sapiens

Chromosome 7: 92,759,368-92,777,682 a

SAMD9L_Hosa

 

Northern white-cheeked gibbon

Nomascus leucogenys

SuperContig GL397261.1: 24,263,209-24,320,238 a

SAMD9L_Nole

 

Rhesus monkey

Macaca mulatta

Chromosome 3: 124,099,607-124,117,554 a

SAMD9L_Mamu

 

Sumatran orangutan

Pongo abelii

Chromosome 7: 83,003,315-83,008,287 a

SAMD9L_Poab

 

Western gorilla

Gorilla gorilla

Chromosome 7: 90,382,062-90,397,829 a

SAMD9L_Gogo

Proboscidea

African bush elephant

Loxodonta africana

XM_003407146.1b

SAMD9L_Loaf

Rodentia

Brown rat

Rattus norvegicus

Chromosome 4: 28,180,812-28,185,536 a

SAMD9L_Rano

 

Chinese hamster

Cricetulus griseus

XM_003496952.1 b

SAMD9L_Crgr

 

Domestic Guinea pig

Cavia porcellus

scaffold_11: 24,689,192-24,742,963 a

SAMD9L_Capo

 

House mouse

Mus musculus

Chromosome 6: 3,322,257-3,349,571a

SAMD9L_Mumu

Soricomorpha

Common shrew

Sorex araneus

scaffold 194773: 6,206-10,964 a

SAMD9L_Soar

  1. Database ID: aEnsembl; bNCBI GenBank.