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Table 3 Recombination test using the RDP program

From: Evolution by selection, recombination, and gene duplication in MHC class I genes of two Rhacophoridae species

  Recombinant sequence Nucleotide breakpoint Potential parental sequences Methods
1 Rhom16 239 Rhom13/Unknown(Rhom17) GENECONV, BootScan, MaxChi, Chimaera, Siscan, 3Seq
2 Pome06 239 Rhom15/Rhom18 GENECONV, BootScan, MaxChi, Chimaera, Siscan, 3Seq
3 Rhom17 141 Rhom12/Unknown(Rhom05) GENECONV, MaxChi, Chimaera, Siscan, 3Seq
4 Pome04 334 Rhom10/Unknown(Rhom12) MaxChi, Chimaera, Siscan, 3Seq
5 Rhom08 229 Rhom15/Rhom18 RDP, GENECONV, BootScan, MaxChi, Chimaera, Siscan, 3Seq